PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS3651475 to PF06722 (EryCIII-like_C)

VIMSS3651475 has 415 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-66  209.3   0.2    1.9e-66  208.6   0.2    1.4  1  VIMSS3651475  


Domain annotation for each sequence (and alignments):
>> VIMSS3651475  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  208.6   0.2   1.9e-66   1.9e-66       2     145 .]     269     409 ..     268     409 .. 0.99

  Alignments for each domain:
  == domain 1  score: 208.6 bits;  conditional E-value: 1.9e-66
  EryCIII-like_C   2 avldqvaelDaEivvaldedarpdlrelpdnvRlvdfvPlgvllptcaaivHhgGagstltalsfGvPqvvlpdeadaavrarrvaelGagivls 96 
                     ++l+q+a++D+Eivv+    + pd++++pdn+RlvdfvP+gvll++caai+HhgGag+++tal++G+Pq+++++e+d+++r++++aelGagi+l+
    VIMSS3651475 269 RTLAQLARFDGEIVVT---GSGPDTSAVPDNIRLVDFVPMGVLLQNCAAIIHHGGAGTWATALHHGIPQISVAHEWDCMLRGQQTAELGAGIYLR 360
                     689*************...**************************************************************************** PP

  EryCIII-like_C  97 kdeltsdsiakavaevvedpayraaaaklaeeiaaePsPtEvakkleel 145
                     +de+++ds+a+a+++vvedp+y+++a+kl+ee++++P+P+E++++leel
    VIMSS3651475 361 PDEVDADSLASALTQVVEDPTYTENAVKLREEALSDPTPQEIVPRLEEL 409
                     ***********************************************97 PP



Or compare VIMSS3651475 to CDD or PaperBLAST