PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::3ia7A to PF06722 (EryCIII-like_C)

biolip::3ia7A has 397 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      1e-25   76.5   0.8    9.3e-25   73.4   0.4    2.1  2  biolip::3ia7A  


Domain annotation for each sequence (and alignments):
>> biolip::3ia7A  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    1.1   0.0     0.018     0.018      80     111 ..      40      71 ..      35     102 .. 0.84
   2 !   73.4   0.4   9.3e-25   9.3e-25      26     143 ..     271     389 ..     250     391 .. 0.92

  Alignments for each domain:
  == domain 1  score: 1.1 bits;  conditional E-value: 0.018
  EryCIII-like_C  80 avrarrvaelGagivlskdeltsdsiakavae 111
                     ++ a +v++ Ga +vl k+e ++ ++ + v++
   biolip::3ia7A  40 PLFADEVKAAGAEVVLYKSEFDTFHVPEVVKQ 71 
                     667899999*********99998877776654 PP

  == domain 2  score: 73.4 bits;  conditional E-value: 9.3e-25
  EryCIII-like_C  26 lrelpdnvRlvdfvPlgvllptcaaivHhgGagstltalsfGvPqvvlpde.adaavrarrvaelGagivlskdeltsdsiakavaevvedpayr 119
                     l+ lp+nv   +++P++ +l  + a + hg +g++l a  +GvP v++p++  +aa  a+rv elG g vl++d+l+++si++av+++ +d a r
   biolip::3ia7A 271 LGPLPPNVEAHQWIPFHSVLAHARACLTHGTTGAVLEAFAAGVPLVLVPHFaTEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVR 365
                     6789***********************************************4455668************************************* PP

  EryCIII-like_C 120 aaaaklaeeiaaePsPtEvakkle 143
                     +   +++++i+++  P+  a ++e
   biolip::3ia7A 366 ERVRRMQRDILSSGGPARAADEVE 389
                     ****************99998887 PP



Or compare biolip::3ia7A to CDD or PaperBLAST