NP_001321400.1 has 184 amino acids
Query: DUF1218 [M=95]
Accession: PF06749.16
Description: Protein of unknown function (DUF1218)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.9e-28 83.0 5.3 2.4e-24 72.0 5.0 2.1 2 NP_001321400.1
Domain annotation for each sequence (and alignments):
>> NP_001321400.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 9.4 0.0 7.9e-05 7.9e-05 39 86 .. 16 64 .. 4 66 .. 0.62
2 ! 72.0 5.0 2.4e-24 2.4e-24 1 94 [. 67 156 .. 67 157 .. 0.86
Alignments for each domain:
== domain 1 score: 9.4 bits; conditional E-value: 7.9e-05
DUF1218 39 fvlswitfaiAealllaGaslnakhtkenhrq...leesCytlkkgvFaaa 86
f++ +++f++++a ++ s++ ++ k + + + esCy+ +++ F+ +
NP_001321400.1 16 FLFFMFIFLFGLAAFFLCLSAEFQKAKGK--DlkwDGESCYLPENRAFGLG 64
44444444444444444444454444433..12347899*******99876 PP
== domain 2 score: 72.0 bits; conditional E-value: 2.4e-24
DUF1218 1 AavllllaqvianvvsgclccgkelspssakrtlavvffvlswitfaiAealllaGaslnakhtkenhrq..leesCytlkkgvFaaaailslvt 93
A+v++ +aq+++nvv++ ++++++ ++++++++++sw+ fa+A++l+ +Gas+n+++ + + l+ +Cy++k+gvFaa+++ls+ t
NP_001321400.1 67 ALVCVSVAQIVGNVVICRG---FTKTDKTRTTIFCIILLLFSWVNFAVAVTLISVGASMNREQI---YGKgwLNRECYLVKDGVFAASGFLSVTT 155
89************76555...5555555677*****************************444...555689999*****************99 PP
DUF1218 94 a 94
+
NP_001321400.1 156 M 156
8 PP
Or compare NP_001321400.1 to CDD or PaperBLAST