PaperBLAST – Find papers about a protein or its homologs

 

Align A4FUH5 to PF06784 (UPF0240)

A4FUH5 has 175 amino acids

Query:       UPF0240  [M=173]
Accession:   PF06784.15
Description: Uncharacterised protein family (UPF0240)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.2e-69  219.0   1.5    2.7e-69  218.7   1.5    1.0  1  A4FUH5    


Domain annotation for each sequence (and alignments):
>> A4FUH5  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  218.7   1.5   2.7e-69   2.7e-69       1     172 [.       1     166 [.       1     167 [. 0.90

  Alignments for each domain:
  == domain 1  score: 218.7 bits;  conditional E-value: 2.7e-69
  UPF0240   1 mgavlslvaRpvrnfnvEnRaekviskeKPkpAPkhpstekkleevleekpeikeelskkdeqLlsrLkdvyVeSkdpvskveaeqeekkkeerrlpksrsk 102
              mga   +vaR+vrnfn+EnRae++is++KP+pAP+hpst++ l e+++++peik e+++kd++Lls+LkdvyV+S+dpvs+ +     k  + r++pk+ + 
   A4FUH5   1 MGA---AVARAVRNFNLENRAEREISRMKPSPAPRHPSTKNLLLEQMSSHPEIKGEIDRKDDKLLSLLKDVYVDSQDPVSSLQ----VKDATARQKPKEFRL 95 
              788...9***********************************************************************84333....333334555555555 PP

  UPF0240 103 vedfefgllepekvpkGkitlrqalellsnhqadpekwtaekiakeYkLeekdvknllkyFktFevki.Pe 172
              ++d +f++++++++pkGki++++al+ll+nh+  p++wta+kia+eY+Le++dv++llkyF+tFevki P+
   A4FUH5  96 PKDHQFDMMDVKNIPKGKISIVEALTLLNNHKLYPDTWTAKKIAEEYHLEQQDVNSLLKYFVTFEVKIfPP 166
              55569***************************************************************976 PP



Or compare A4FUH5 to CDD or PaperBLAST