NP_054884.1 has 175 amino acids
Query: UPF0240 [M=173]
Accession: PF06784.15
Description: Uncharacterised protein family (UPF0240)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.4e-66 208.6 0.6 3.8e-66 208.5 0.6 1.0 1 NP_054884.1
Domain annotation for each sequence (and alignments):
>> NP_054884.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 208.5 0.6 3.8e-66 3.8e-66 1 172 [. 1 166 [. 1 168 [. 0.92
Alignments for each domain:
== domain 1 score: 208.5 bits; conditional E-value: 3.8e-66
UPF0240 1 mgavlslvaRpvrnfnvEnRaekviskeKPkpAPkhpstekkleevleekpeikeelskkdeqLlsrLkdvyVeSkdpv.skve.aeqeekkkeerrl 96
mga lv R +rnfn+EnRae++isk+KP++AP+hpst++ l+e+++ +pe+k e+ +kde+Lls LkdvyV+Skdpv s ++ a ++ ++ +e rl
NP_054884.1 1 MGA---LVIRGIRNFNLENRAEREISKMKPSVAPRHPSTNSLLREQISLYPEVKGEIARKDEKLLSFLKDVYVDSKDPVsSLQVkAAETCQEPKEFRL 95
788...9***********************************************************************95444434444455567777 PP
UPF0240 97 pksrskvedfefgllepekvpkGkitlrqalellsnhqadpekwtaekiakeYkLeekdvknllkyFktFevki.Pe 172
pk++ +f++++++++pkGki++++al+ll+nh+ pe+wtaeki++eY+Le+kdv++llkyF+tFev+i P+
NP_054884.1 96 PKDH------HFDMINIKSIPKGKISIVEALTLLNNHKLFPETWTAEKIMQEYQLEQKDVNSLLKYFVTFEVEIfPP 166
7776......9***************************************************************965 PP
Or compare NP_054884.1 to CDD or PaperBLAST