PaperBLAST – Find papers about a protein or its homologs

 

Align Q9NQR8 to PF06784 (UPF0240)

Q9NQR8 has 174 amino acids

Query:       UPF0240  [M=173]
Accession:   PF06784.15
Description: Uncharacterised protein family (UPF0240)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.2e-65  205.5   2.5    3.7e-65  205.3   2.5    1.0  1  Q9NQR8    


Domain annotation for each sequence (and alignments):
>> Q9NQR8  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  205.3   2.5   3.7e-65   3.7e-65       1     172 [.       1     165 [.       1     167 [. 0.92

  Alignments for each domain:
  == domain 1  score: 205.3 bits;  conditional E-value: 3.7e-65
  UPF0240   1 mgavlslvaRpvrnfnvEnRaekviskeKPkpAPkhpstekkleevleekpeikeelskkdeqLlsrLkdvyVeSkdpv.skve.aeqeekkkeerrlpksr 100
              mga   +++R++rnfnvE+Rae++isk+KP++APkhpst++ l+e+l+++pei+ee+s+kd++Lls+L+dvyV+Skdpv s  + a + +++ +e rlp  +
   Q9NQR8   1 MGA---RMTRAFRNFNVEKRAEQEISKRKPSMAPKHPSTRSLLQEHLSQYPEIEEEVSRKDNKLLSLLRDVYVNSKDPVpSLPVkAIEPQQQPKEFRLPIGD 99 
              788...************************************************************************976655344445555678888886 PP

  UPF0240 101 skvedfefgllepekvpkGkitlrqalellsnhqadpekwtaekiakeYkLeekdvknllkyFktFevki.Pe 172
                    +f+ ++++++pkGkit+++al+ll+nh+ +pe+wtaekia+eY+Le +dv++llkyF+tFevki P+
   Q9NQR8 100 ------QFD-KNIKDIPKGKITVVEALTLLNNHKLSPETWTAEKIAQEYHLELEDVNSLLKYFVTFEVKIvPP 165
              ......898.89**********************************************************965 PP



Or compare Q9NQR8 to CDD or PaperBLAST