VIMSS5386 has 337 amino acids
Query: DUF1246 [M=122]
Accession: PF06849.16
Description: Protein of unknown function (DUF1246)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-39 119.6 0.0 7.9e-39 118.7 0.0 1.5 1 VIMSS5386
Domain annotation for each sequence (and alignments):
>> VIMSS5386
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 118.7 0.0 7.9e-39 7.9e-39 1 122 [] 8 122 .. 8 122 .. 0.93
Alignments for each domain:
== domain 1 score: 118.7 bits; conditional E-value: 7.9e-39
DUF1246 1 iatlaSHsalqilkgAkkegfktvavcekgreklYekf.kvidevivldkfkdileeevqeklreenailvPhgsfveyvgiekieklkvpifGnrkllr 99
iat aSHsalqilkgAk+egf+t+a+ +++ + lY+k+ +v+d ++v k+ +++l e na+++P gsfv+++g+e +e++kvp+fGn+++l+
VIMSS5386 8 IATYASHSALQILKGAKDEGFETIAFGSERVKPLYTKYfPVADYFLV-GKYP-------EDELLELNAVVIPTGSFVAHLGVELVERMKVPYFGNKRVLK 99
89***********************************9788887776.4444.......4689************************************* PP
DUF1246 100 wEedrekkrklLekAgiriPkkf 122
wE+dr+ +rk+LekA++++P+++
VIMSS5386 100 WESDRNLERKWLEKAKLKLPRVY 122
********************986 PP
Or compare VIMSS5386 to CDD or PaperBLAST