VIMSS938401 has 380 amino acids
Query: DUF1246 [M=122]
Accession: PF06849.16
Description: Protein of unknown function (DUF1246)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-47 145.5 0.0 5.7e-47 145.0 0.0 1.3 1 VIMSS938401
Domain annotation for each sequence (and alignments):
>> VIMSS938401
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 145.0 0.0 5.7e-47 5.7e-47 1 120 [. 21 153 .. 21 155 .. 0.98
Alignments for each domain:
== domain 1 score: 145.0 bits; conditional E-value: 5.7e-47
DUF1246 1 iatlaSHsalqilkgAkkegfktvavcekgreklYekf............kvidevivldkfkdileeevqeklreenailvPhgsfveyvgiekie. 85
+++++SHsal+i++gAk egfkt++v+++gr+++Y ++ ++id+vivl+kf +i+ evqe+lr++n+i+vP++sfv+y+gi+++e
VIMSS938401 21 VGVIGSHSALDIADGAKAEGFKTIVVAQRGRHRTYAEYfkekktrdgltkGFIDDVIVLEKFGQII--EVQEELRKRNVIFVPNRSFVVYTGIDRVEn 116
799***************************************************************..678*************************** PP
DUF1246 86 klkvpifGnrkllrwEedrekkrkl..LekAgiriPk 120
++ vp+fG+r+llr+Ee++e+k+++ LekAg+++P+
VIMSS938401 117 EFLVPLFGSRNLLRSEERSEEKSYYwlLEKAGLPYPE 153
************************99**********8 PP
Or compare VIMSS938401 to CDD or PaperBLAST