PaperBLAST – Find papers about a protein or its homologs

 

Align WP_003095693.1 to PF06853 (DUF1249)

WP_003095693.1 has 152 amino acids

Query:       DUF1249  [M=116]
Accession:   PF06853.16
Description: Protein of unknown function (DUF1249)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-48  149.5   0.1    2.4e-48  149.2   0.1    1.1  1  WP_003095693.1  


Domain annotation for each sequence (and alignments):
>> WP_003095693.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.2   0.1   2.4e-48   2.4e-48       1     116 []      27     145 ..      27     145 .. 0.98

  Alignments for each domain:
  == domain 1  score: 149.2 bits;  conditional E-value: 2.4e-48
         DUF1249   1 rLlrLlpdleeleeervvsven....kldlalevlerarYTttleltqefeeleelpepkltvRlYhDarlaEVlsaqqrrrlkarydypnkkmh 91 
                     rL+rLlpd++e++++r+v++++     + lalev+e ++YTttl+++qe   l++lp p+l+vR+YhDar+aEV+ a+q rrl a y ypn++mh
  WP_003095693.1  27 RLMRLLPDMREAQASRRVALSEgerlLGVLALEVTEACPYTTTLQVRQELG-LPWLPAPRLEVRVYHDARMAEVIGAEQARRLMAIYPYPNQAMH 120
                     8*********************999999*********************99.******************************************* PP

         DUF1249  92 qldeKlqlNlFLaeWLeyclkqghs 116
                     q+deK qlNlFL+eWL +cl++gh+
  WP_003095693.1 121 QPDEKNQLNLFLGEWLAHCLACGHE 145
                     ***********************95 PP



Or compare WP_003095693.1 to CDD or PaperBLAST