PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS201566 to PF07023 (DUF1315)

VIMSS201566 has 93 amino acids

Query:       DUF1315  [M=82]
Accession:   PF07023.16
Description: Protein of unknown function (DUF1315)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-24   71.6   0.1    2.8e-24   71.4   0.1    1.0  1  VIMSS201566  


Domain annotation for each sequence (and alignments):
>> VIMSS201566  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   71.4   0.1   2.8e-24   2.8e-24       2      74 ..       6      81 ..       5      88 .. 0.93

  Alignments for each domain:
  == domain 1  score: 71.4 bits;  conditional E-value: 2.8e-24
      DUF1315  2 qllasltpdvyqklkrAvEiGkWpdGsrlTeeQRelcmqAViiyeakhlpeeerv.....GyikrkskeGeelkkdee 74
                 q+++++  +vy +l+ A E+GkW dG++lTe+QRe+++q V++y+a+ l+++++      G++++ sk+  elkk++ 
  VIMSS201566  6 QVIDQMPVEVYDRLRSAAELGKWEDGTVLTEAQRESTLQVVMLYQARRLEQTDHFtigagGKLNELSKA--ELKKQFR 81
                 89****************************************************99***99******99..8887765 PP



Or compare VIMSS201566 to CDD or PaperBLAST