VIMSS123416 has 54 amino acids
Query: DUF1328 [M=39]
Accession: PF07043.17
Description: Protein of unknown function (DUF1328)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-20 58.3 26.9 1.5e-18 53.2 20.0 2.0 2 VIMSS123416
Domain annotation for each sequence (and alignments):
>> VIMSS123416
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 53.2 20.0 1.5e-18 1.5e-18 1 35 [. 6 40 .. 6 41 .. 0.97
2 ! 12.4 1.9 8.5e-06 8.5e-06 1 12 [. 39 50 .. 39 51 .. 0.93
Alignments for each domain:
== domain 1 score: 53.2 bits; conditional E-value: 1.5e-18
DUF1328 1 liFlviAliAgvlGFgGiAgaaagIAkiLFfiFlv 35
l+Fl++A+iAgvlGFgGiAga+agIA++LFf+Fl+
VIMSS123416 6 LVFLIVAIIAGVLGFGGIAGASAGIAQVLFFLFLI 40
79********************************9 PP
== domain 2 score: 12.4 bits; conditional E-value: 8.5e-06
DUF1328 1 liFlviAliAgv 12
liFlvi+l+Ag+
VIMSS123416 39 LIFLVISLVAGL 50
7**********7 PP
Or compare VIMSS123416 to CDD or PaperBLAST