PaperBLAST – Find papers about a protein or its homologs

 

Align WP_003103009.1 to PF07044 (DUF1329)

WP_003103009.1 has 455 amino acids

Query:       DUF1329  [M=367]
Accession:   PF07044.15
Description: Protein of unknown function (DUF1329)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   4.6e-166  538.6  11.5   5.3e-166  538.4  11.5    1.0  1  WP_003103009.1  


Domain annotation for each sequence (and alignments):
>> WP_003103009.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  538.4  11.5  5.3e-166  5.3e-166       1     367 []      85     450 ..      85     450 .. 0.99

  Alignments for each domain:
  == domain 1  score: 538.4 bits;  conditional E-value: 5.3e-166
         DUF1329   1 vItaaNveqykdkLsegqkallkkyp.tyrldVypthrsaaapqevyeatkknatkakldadGnglegavagiPFPiPktGleviWNhllryrge 94 
                     +Ita+Nv+qykdkL++gq a++k+yp ty+++Vy+thrsa++p +v+ea+k+nat++kl+++Gngle++ +++PFPiP++GleviWNh++ryrg+
  WP_003103009.1  85 TITAQNVDQYKDKLTPGQLAMFKRYPdTYKIPVYKTHRSATVPAAVQEAAKRNATTTKLVEGGNGLENFDTANPFPIPQNGLEVIWNHITRYRGG 179
                     7********************************************************************************************** PP

         DUF1329  95 averaiaqaavqasGsvtlvkaeeellfayyyedkkkelkelenvlfylllevtaParlaGeallvhetldqvkeprdawlYlpgqRRVRraPel 189
                     +v+r ++qa++q +Gs++lv +++ ++f+++ +d +++  +++nvlfy++++vtaP+rlaG++llvhetl+qvkepr awlY++gqRRVRraP++
  WP_003103009.1 180 SVRRLVTQATPQVNGSYQLVYFQDAFTFRTNLKDYNPN--KPSNVLFYFKQRVTAPSRLAGNVLLVHETLNQVKEPRLAWLYNAGQRRVRRAPQV 272
                     ********************************888877..9****************************************************** PP

         DUF1329 190 ayDtpqaatgglltlDdldmfnGapdrydwklvgkkemyvpynnykleskklkyadllkpghlnpdlvryelhrVwvveAtlkegkrhiyskrvf 284
                     +yD p++a++gl+t+D++dm+nGapdrydwkl gkke+y+pyn+ykl+++k ky++++k+gh+n+dl+ryelhrVw v Atlk+g+rhiy+kr f
  WP_003103009.1 273 SYDGPGTAADGLRTSDNFDMYNGAPDRYDWKLEGKKEIYIPYNSYKLDDPKIKYSEIVKAGHINQDLTRYELHRVWHVVATLKPGERHIYAKRDF 367
                     *********************************************************************************************** PP

         DUF1329 285 YlDedswqivaadqYDarGeLwrvseahlinaydvpavwstlevlyDlqsgrytvdglkneekk.vefekkaeeadyftpdaLr 367
                     Y+Ded+wq++ +d+YD+rG Lwrv+eah  ++yd++++w+++e+lyDl sgry++ g+kneek+ ++f+ +a+e+d +tp+aLr
  WP_003103009.1 368 YIDEDTWQAAEIDHYDGRGTLWRVAEAHAEQYYDKQVPWYAVETLYDLLSGRYLALGMKNEEKQaYDFNYSASESD-YTPAALR 450
                     *********************************************************************9998888.*****98 PP



Or compare WP_003103009.1 to CDD or PaperBLAST