biolip::3bk5A has 235 amino acids
Query: DUF1329 [M=367]
Accession: PF07044.15
Description: Protein of unknown function (DUF1329)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.6e-17 48.3 1.0 1.8e-10 26.6 0.9 2.1 2 biolip::3bk5A
Domain annotation for each sequence (and alignments):
>> biolip::3bk5A
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 20.2 0.0 1.6e-08 1.6e-08 147 214 .. 59 121 .. 44 129 .. 0.83
2 ! 26.6 0.9 1.8e-10 1.8e-10 258 343 .. 131 215 .. 119 234 .. 0.80
Alignments for each domain:
== domain 1 score: 20.2 bits; conditional E-value: 1.6e-08
DUF1329 147 vtaParlaGeallvhetldqvkeprdawlYlpgqRRVRraPelayDtpqaatgglltlDdldmfnGap 214
+ +P +++G+a+l+h+ ++ d wlYlp+ +RV+r+++ ++++g+ + ++dl+ f+ +
biolip::3bk5A 59 FDQPRDVTGTAFLNHSHTIGAD---DQWLYLPALKRVKRISSRNKS--GPFMGSEFAYEDLSSFEIEK 121
789************9877776...89*************998765..68888889999988886444 PP
== domain 2 score: 26.6 bits; conditional E-value: 1.8e-10
DUF1329 258 ryelhrVwvveAtlkegkrhiyskrvfYlDedswqivaadqYDarGeLwrvseahlinaydvpavwstlevlyDlqsgrytvdglk 343
++ V+v+e + ++ + y k v++lD ++++ ++ YD++G+L ++ ++++y + + + ++++ + q+g+ t +++
biolip::3bk5A 131 KFNGQDVFVLEQIPTDK-NSGYTKQVVWLDKAHYRPLKVEFYDRKGALLKTLTFANYKQYLDKYWRAHTMAMTNHQTGKSTELNTS 215
66778899999888866.999*****************************7766667777777788899999****9999866554 PP
Or compare biolip::3bk5A to CDD or PaperBLAST