PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS346161 to PF07166 (DUF1398)

VIMSS346161 has 131 amino acids

Query:       DUF1398  [M=119]
Accession:   PF07166.15
Description: Protein of unknown function (DUF1398)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.8e-52  160.4   3.5    1.1e-51  160.2   3.5    1.0  1  VIMSS346161  


Domain annotation for each sequence (and alignments):
>> VIMSS346161  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.2   3.5   1.1e-51   1.1e-51       1     119 []       8     126 ..       8     126 .. 0.99

  Alignments for each domain:
  == domain 1  score: 160.2 bits;  conditional E-value: 1.1e-51
      DUF1398   1 kkafekvrsdadfpafiqelkrlgvshYeyfvatgnvkyvtendevvsvkakrellkvaekknaekikaalkkhqsgeitfeqfceelAkaGvfkWiv 98 
                  +++fe+vr+da+f+af+ +l+++++++Y+yfvatgnvk++t++++++s+k++r+l+kv++++n+++ik +++kh+sge+++e++c++lA+aGvfkWiv
  VIMSS346161   8 NHFFERVRKDANFNAFLIDLEYNNIAYYIYFVATGNVKIITHAGHFISIKSNRKLIKVNSTPNTQLIKLTSAKHFSGEHSYEKYCTDLATAGVFKWIV 105
                  689*********************************************************************************************** PP

      DUF1398  99 dlnektrsYydkdnslLlaEs 119
                  +ln+ktr+Y++kdn+lL++E+
  VIMSS346161 106 ELNKKTRQYWSKDNQLLYIEN 126
                  *******************96 PP



Or compare VIMSS346161 to CDD or PaperBLAST