PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS52767 to PF07226 (DUF1422)

VIMSS52767 has 123 amino acids

Query:       DUF1422  [M=114]
Accession:   PF07226.15
Description: Protein of unknown function (DUF1422)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.1e-54  169.6   2.2    1.3e-54  169.4   2.2    1.0  1  VIMSS52767  


Domain annotation for each sequence (and alignments):
>> VIMSS52767  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  169.4   2.2   1.3e-54   1.3e-54       2     112 ..       9     119 ..       8     121 .. 0.98

  Alignments for each domain:
  == domain 1  score: 169.4 bits;  conditional E-value: 1.3e-54
     DUF1422   2 qkkaekktllLalvaGlsvnatlaalfssvvafsifplialvlavyclyqrylnkaleeglPllalacfllGvlgysalvraeyPeiGsnflsivlslv 100
                 +++ae+ktl+LalvaG++++a+l++l++s+v+fs+f+lialvl++++lyq+yl+++++e++Pl+ lacf++G++g+sa+++a+yP+ Gsnf+siv++l+
  VIMSS52767   9 STRAERKTLILALVAGMCSDALLSWLTMSSVPFSLFALIALVLSAQMLYQEYLAHPVAEEVPLVGLACFFVGAFGHSAFIKAQYPQEGSNFFSIVIVLL 107
                 6899*********************************************************************************************** PP

     DUF1422 101 lvlwiavklkir 112
                 l++wi++kl+++
  VIMSS52767 108 LIFWIGRKLGYI 119
                 *********976 PP



Or compare VIMSS52767 to CDD or PaperBLAST