PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS859194 to PF07233 (DUF1425)

VIMSS859194 has 116 amino acids

Query:       DUF1425  [M=96]
Accession:   PF07233.16
Description: Protein of unknown function (DUF1425)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.2e-13   34.8   0.4    8.5e-13   34.4   0.4    1.2  1  VIMSS859194  


Domain annotation for each sequence (and alignments):
>> VIMSS859194  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.4   0.4   8.5e-13   8.5e-13      27      95 ..      45     116 .]      35     116 .] 0.87

  Alignments for each domain:
  == domain 1  score: 34.4 bits;  conditional E-value: 8.5e-13
      DUF1425  27 llrasvvlenksktdltlqYrFyWyDedGle.vepea..epwqsltlhgkesvtlqavapnprAskfrlyvr 95 
                   ++ s+v++nks++ l++ Y  yWyD  G++ +++++  +   ++ l+++e++++  ++p+ + +++rly++
  VIMSS859194  45 TTQKSAVIKNKSQQLLNVSYHLYWYDHLGVTqIWENQqeSYSAQFSLKPQEEKSIDLIKPTVESKNYRLYLK 116
                  57889************************8536555422667899*************************85 PP



Or compare VIMSS859194 to CDD or PaperBLAST