PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS3730754 to PF07286 (D-Glu_cyclase)

VIMSS3730754 has 272 amino acids

Query:       D-Glu_cyclase  [M=143]
Accession:   PF07286.16
Description: D-glutamate cyclase
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.7e-70  221.6   0.1    2.1e-70  221.3   0.1    1.1  1  VIMSS3730754  


Domain annotation for each sequence (and alignments):
>> VIMSS3730754  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  221.3   0.1   2.1e-70   2.1e-70       1     143 []     121     263 ..     121     263 .. 1.00

  Alignments for each domain:
  == domain 1  score: 221.3 bits;  conditional E-value: 2.1e-70
  D-Glu_cyclase   1 VtFliGcSfsfeeaLleaglpvrhieegrnvpmYktnielepagvfsgklvvsmrpikkdkvekavqitsrlpkvhGapvhiGdpellgikdlskp 96 
                    VtF+iGcS sfeeaL++a++p+rh+e+g +vpm++tni++ pag+f+g++vvsmrp++ +++ +avqitsr+p+vhGap+hiG pe++gikdlskp
   VIMSS3730754 121 VTFAIGCSLSFEEALMAADIPLRHVEKGVKVPMFRTNIACVPAGPFAGPMVVSMRPMTPANAIRAVQITSRFPSVHGAPIHIGLPEAIGIKDLSKP 216
                    8*********************************************************************************************** PP

  D-Glu_cyclase  97 dyGdaveikegevPvFwacgvTpqeavmsaklelaithapghmlvtd 143
                    dyGdavei ege+PvFwacgvTpq+++++ak+e+a++h pg+ml+td
   VIMSS3730754 217 DYGDAVEILEGEIPVFWACGVTPQSVISAAKIEYALAHGPGMMLCTD 263
                    *********************************************98 PP



Or compare VIMSS3730754 to CDD or PaperBLAST