PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS5672271 to PF07314 (DUF1461)

VIMSS5672271 has 211 amino acids

Query:       DUF1461  [M=176]
Accession:   PF07314.15
Description: Protein of unknown function (DUF1461)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-48  151.8  11.5    1.5e-48  151.3  11.5    1.2  1  VIMSS5672271  


Domain annotation for each sequence (and alignments):
>> VIMSS5672271  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  151.3  11.5   1.5e-48   1.5e-48       4     176 .]       8     181 ..       6     181 .. 0.95

  Alignments for each domain:
  == domain 1  score: 151.3 bits;  conditional E-value: 1.5e-48
       DUF1461   4 slllilvilllsielvinfk.plyeleieklkleekvgmskeelkenykelidYlkgklkekLklpaffssekelaHfedVkkLfllalivrlvsli 99 
                   +l+ ++++l+l+i ++i+++  +y le+++lkle+ v msk+ +++ny+ l++Yl++++ ++L++ +f+ss+++l+Hf+dVk Lf+l+++v+l +l+
  VIMSS5672271   8 LLCSWVWLLALAILITIYSTwLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFVTRLEFANFHSSADGLKHFADVKWLFHLTQVVFLGLLY 104
                   57999**************96889************************************************************************* PP

       DUF1461 100 lllllliklkkkkkklkllkllalilllllllillllaaidFdkfFtlfHkifF.nndlWlfdpatdpiInilPeeFF 176
                    +l +++++ k+k+ + l k+l l++ l++l+i+l++ +i+F++fFtlfHk++F  ++ Wlfdp +dp+I+ilPe FF
  VIMSS5672271 105 PTLKTFTQRLKTKRFWLLQKPLILAA-LFPLMIGLMASFIGFEHFFTLFHKVLFvGDSSWLFDPLKDPVIWILPEVFF 181
                   **777777777779999999887777.8999**********************************************9 PP



Or compare VIMSS5672271 to CDD or PaperBLAST