PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS150652 to PF07338 (YdgH_BhsA-like)

VIMSS150652 has 87 amino acids

Query:       YdgH_BhsA-like  [M=55]
Accession:   PF07338.17
Description: YdgH/BhsA/McbA-like domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      4e-27   80.3   0.3    6.1e-27   79.8   0.3    1.3  1  VIMSS150652  


Domain annotation for each sequence (and alignments):
>> VIMSS150652  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.8   0.3   6.1e-27   6.1e-27       2      55 .]      35      87 .]      34      87 .] 0.98

  Alignments for each domain:
  == domain 1  score: 79.8 bits;  conditional E-value: 6.1e-27
  YdgH_BhsA-like  2 qpiGtisvtgvfsslsdleaalakkAdakGAksYrIisasenggnlrgtAdlYk 55
                    + iG++sv+ + ss++d++a l+kkAd++GA++Y+I++a++ g+n+++tA+lYk
     VIMSS150652 35 EAIGSVSVSAIGSSPMDMNAMLSKKADEQGATAYHITEARS-GSNWHATAELYK 87
                    679**************************************.***********9 PP



Or compare VIMSS150652 to CDD or PaperBLAST