PaperBLAST – Find papers about a protein or its homologs

 

Align WP_038636544.1 to PF07338 (YdgH_BhsA-like)

WP_038636544.1 has 109 amino acids

Query:       YdgH_BhsA-like  [M=55]
Accession:   PF07338.17
Description: YdgH/BhsA/McbA-like domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.4e-18   53.0   0.1    1.8e-18   52.6   0.1    1.2  1  WP_038636544.1  


Domain annotation for each sequence (and alignments):
>> WP_038636544.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.6   0.1   1.8e-18   1.8e-18       1      55 []      53     108 ..      53     108 .. 0.99

  Alignments for each domain:
  == domain 1  score: 52.6 bits;  conditional E-value: 1.8e-18
  YdgH_BhsA-like   1 lqpiGtisvtgvfsslsdleaalakkAdakGAksYrIisase..nggnlrgtAdlYk 55 
                     lq+iGt+s+  v++s++d+ a++  kA a+ A++Y++  ++e    g+++ +A+lY+
  WP_038636544.1  53 LQRIGTVSAL-VRGSPDDALAEIRDKAVAAKADYYVVLLVDEtiVTGQWYSQAILYR 108
                     79********.*********************************************8 PP



Or compare WP_038636544.1 to CDD or PaperBLAST