PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS3749989 to PF07510 (DUF1524)

VIMSS3749989 has 281 amino acids

Query:       DUF1524  [M=139]
Accession:   PF07510.15
Description: Protein of unknown function (DUF1524)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-19   56.0   0.0    2.7e-19   55.7   0.0    1.1  1  VIMSS3749989  


Domain annotation for each sequence (and alignments):
>> VIMSS3749989  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.7   0.0   2.7e-19   2.7e-19       2     125 ..     137     262 ..     136     275 .. 0.89

  Alignments for each domain:
  == domain 1  score: 55.7 bits;  conditional E-value: 2.7e-19
       DUF1524   2 prddeferdledkklyrssskklryilagrlesdlyeedesknsskkefd....iEHilPqnlaekwgageddeekreelvndlgNLtlltgslN.. 92 
                   +rdd++ rdl+ + + +s+  +   + ag+l+ d y+ ++++    + ++    i+H++P+++a++ ga+ +++e re+l+ d+  L +++g++N  
  VIMSS3749989 137 QRDDVLVRDLARVAFAPSDPGC--TVVAGHLD-DVYTGHGIDFARGPRTSaavqIDHLVPLSWAWQHGAWSWSDERRERLATDFDELQAVDGPTNqd 230
                   799****************999..99999***.999899999997777778999*****************************************88 PP

       DUF1524  93 .sslsnkdfleKreayeksclylnrklavkdkwn 125
                    s+    ++l++++ay  +cly++r   v ++++
  VIMSS3749989 231 kSDQGPGTWLPPDAAY--RCLYVTRFAFVVSRYG 262
                   7777799*********..******9766555555 PP



Or compare VIMSS3749989 to CDD or PaperBLAST