PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::8dyeB to PF07896 (DUF1674)

biolip::8dyeB has 43 amino acids

Query:       DUF1674  [M=50]
Accession:   PF07896.16
Description: Protein of unknown function (DUF1674)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.1e-26   79.4   3.4    1.1e-26   79.3   3.4    1.0  1  biolip::8dyeB  


Domain annotation for each sequence (and alignments):
>> biolip::8dyeB  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.3   3.4   1.1e-26   1.1e-26       9      50 .]       2      43 .]       1      43 [] 0.97

  Alignments for each domain:
  == domain 1  score: 79.3 bits;  conditional E-value: 1.1e-26
        DUF1674  9 aakpakefekdvnpktgEigGpkgpEPtRygDWerkGrvsDF 50
                   +++p ++f++dvnp t+E gGp+gpEPtRygDWerkGr++DF
  biolip::8dyeB  2 EKEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 43
                   68999************************************* PP



Or compare biolip::8dyeB to CDD or PaperBLAST