NP_001314711.1 has 485 amino acids
Query: CCDC47 [M=327]
Accession: PF07946.18
Description: PAT complex subunit CCDC47
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-83 265.3 6.9 4.6e-83 265.1 6.9 1.0 1 NP_001314711.1
Domain annotation for each sequence (and alignments):
>> NP_001314711.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 265.1 6.9 4.6e-83 4.6e-83 2 327 .] 158 475 .. 157 475 .. 0.94
Alignments for each domain:
== domain 1 score: 265.1 bits; conditional E-value: 4.6e-83
CCDC47 2 fklEililallllyvllyfiGkrkNkklakkwl...kahkplleknFalvgfdeekeksllkeesesefttyatGRrnvasllvtlklkkRqdll 93
f +Ei ++++l+++vl+yf+Gkr+N+++a +w+ ++ +++++knF+l+g++++k+++ll++e+++ f++ya+GRr ++++l+t++++ R+dll
NP_001314711.1 158 FSVEIACVSFLICFVLNYFTGKRQNENIALAWAtkfATRDSIFDKNFSLLGTGDGKDTPLLLKEGQDVFKFYASGRRFCQGMLATMEMRARHDLL 252
99******************************76658889******************************************************* PP
CCDC47 94 slllelvlsfffesvkapkDrveitvylndgkestmdkfVfAivnKkemkklrkerydl.sltktkdnpk.....lpeelvvmsEsaevteallt 182
s ++elv++ kD+++++v +n+++ md++V+A+++Kk++k+l+ke dl +++ + +++ +++el+v++Es+ev+ +++t
NP_001314711.1 253 SRFVELVFP--------GKDTITFEVVMNEEA---MDHVVLAVARKKAAKTLQKEERDLqRFANVLTSAPagrkwVSDELAVVAESKEVAGDMIT 336
*******44........79**********999...******************************55555578889989**************** PP
CCDC47 183 pell......kalekagdlleyliitDqpsekPeteeetkprkrlilslklpssksdlealkpllelvleliDklakkkaklrpevlkkvkktRe 271
+++l ka+ek+g+++ +l ++Dq + + +k+l +++ lp s+++++++l++lv ++iD + ++kl++++++k++ +R
NP_001314711.1 337 EAVLdqvlgeKAFEKFGKWFISLRFSDQLAG--------SYKKVLAFKFVLPDA-SNMSEMTRLVALVPYYIDLVG--RYKLSSHARSKTDGART 420
**88888899********************7........3457*********55.68*******************..9**************** PP
CCDC47 272 eveekikkeaeeekaEeaqekkeekkkkereeklaklsaeeqrKleeKerkkeakK 327
+++++ +e + +++E++q kk+ekkk +e+ aklsae rK eeKer++++kK
NP_001314711.1 421 KAAQEAFRELQSARQEALQRKKAEKKKLIEEA-DAKLSAESLRKKEEKERARQMKK 475
*******************7777777777777.67********************9 PP
Or compare NP_001314711.1 to CDD or PaperBLAST