NP_080285.2 has 483 amino acids
Query: CCDC47 [M=327] Accession: PF07946.18 Description: PAT complex subunit CCDC47 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.9e-95 303.9 3.0 1e-94 303.4 3.0 1.2 1 NP_080285.2 Domain annotation for each sequence (and alignments): >> NP_080285.2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 303.4 3.0 1e-94 1e-94 1 327 [] 135 467 .. 135 467 .. 0.93 Alignments for each domain: == domain 1 score: 303.4 bits; conditional E-value: 1e-94 CCDC47 1 dfklEililallllyvllyfiGkrkNkklakkwlkahkplleknFalvgfd....eekeksllkeesesefttyatGRrnvasllvtlklkkRqdlls 94 +++lEil++ ll+y+++y+iGk+kN++la++w+++h++lle+nF+lvg d e++++ l +e+e+ + ++++GR +++++l++l+++kRqdll+ NP_080285.2 135 SYYLEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNSHRELLESNFTLVGDDgtnkEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLRFLKRQDLLN 232 69***********************************************88**997777888************************************ PP CCDC47 95 lllelvlsfffesvkapkDrveitvylndgkestmdkfVfAivnKkemkklrkerydl.sltktkdnpk....lpeelvvmsEsaevtealltpellk 187 +l++++ + +D+v+i+v++nd++ md VfA+ ++k++ +l+ke++dl ++++ k ++ lp++l+++sE+ evte +++++++ NP_080285.2 233 VLARMM--------RPVSDQVQIKVTMNDED---MDTYVFAVGTRKALLRLQKEMQDLsEFCSDKPKSGakygLPDSLAILSEMGEVTEGMMDTKMVH 319 ******........5589************9...******************************555545566************************* PP CCDC47 188 alekagdlleyliitDqps........ekPeteeetkprkrlilslklpssks....dlealkpllelvleliDklakkkaklrpevlkkvkktReev 273 +l+ ++d +e+++++Dq s +P + +++l +++++p s + d+e+l pl+++v++ iDk + k++l++e ++k++k+R++v NP_080285.2 320 FLTHYADKIESVHFSDQFSgpkimqeeGQPLK--LPDTKRTLLFTFNVPGSGNtypkDMESLLPLMNMVIYSIDKAK--KFRLNREGKQKADKNRARV 413 *******************7777665433332..245568*********99444678********************..8****************** PP CCDC47 274 eekikkeaeeekaEeaqekkeekkkkereeklaklsaeeqrKleeKerkkeakK 327 ee++ k ++ +++E+aq ++eekk++e+e+ +++ ++e+qr+lee ++e+kK NP_080285.2 414 EENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKK 467 *****************************************************9 PP
Or compare NP_080285.2 to CDD or PaperBLAST