Q5U2X6 has 483 amino acids
Query: CCDC47 [M=327]
Accession: PF07946.18
Description: PAT complex subunit CCDC47
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.8e-95 303.9 3.0 9.8e-95 303.4 3.0 1.2 1 Q5U2X6
Domain annotation for each sequence (and alignments):
>> Q5U2X6
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 303.4 3.0 9.8e-95 9.8e-95 1 327 [] 135 467 .. 135 467 .. 0.93
Alignments for each domain:
== domain 1 score: 303.4 bits; conditional E-value: 9.8e-95
CCDC47 1 dfklEililallllyvllyfiGkrkNkklakkwlkahkplleknFalvgfd....eekeksllkeesesefttyatGRrnvasllvtlklkkRqdllslllel 99
+++lEil++ ll+y+++y+iGk+kN++la++w+++h++lle+nF+lvg d e++++ l +e+e+ + ++++GR +++++l++l+++kRqdll++l+++
Q5U2X6 135 SYYLEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNSHRELLESNFTLVGDDgtnkEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLRFLKRQDLLNVLARM 237
69***********************************************88**997777888***************************************** PP
CCDC47 100 vlsfffesvkapkDrveitvylndgkestmdkfVfAivnKkemkklrkerydl.sltktkdnpk....lpeelvvmsEsaevtealltpellkalekagdlle 197
+ + +D+v+i+v++nd++ md VfA+ ++k++ +l+ke++dl ++++ k ++ lp++l+++sE+ evte +++++++ +l+ ++d +e
Q5U2X6 238 M--------RPVSDQVQIKVTMNDED---MDTYVFAVGTRKALLRLQKEMQDLsEFCSDKPKSGakygLPDSLAILSEMGEVTEGMMDTKMVHFLTHYADKIE 329
*........5589************9...******************************555545566*********************************** PP
CCDC47 198 yliitDqps........ekPeteeetkprkrlilslklpssks....dlealkpllelvleliDklakkkaklrpevlkkvkktReeveekikkeaeeekaEe 288
+++++Dq s +P + +++l +++++p s + d+eal pl+++v++ iDk + k++l++e ++k++k+R++vee++ k ++ +++E+
Q5U2X6 330 SVHFSDQFSgpkimqeeGQPLK--LPDTKRTLLFTFNVPGSGNtypkDMEALLPLMNMVIYSIDKAK--KFRLNREGKQKADKNRARVEENFLKLTHVQRQEA 428
*********7777665433332..245568*********99444678********************..8********************************* PP
CCDC47 289 aqekkeekkkkereeklaklsaeeqrKleeKerkkeakK 327
aq ++eekk++e+e+ +++ ++e+qr+lee ++e+kK
Q5U2X6 429 AQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKK 467
**************************************9 PP
Or compare Q5U2X6 to CDD or PaperBLAST