VIMSS10102155 has 478 amino acids
Query: CCDC47 [M=327] Accession: PF07946.18 Description: PAT complex subunit CCDC47 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.4e-88 281.6 2.1 5.2e-88 281.3 2.1 1.1 1 VIMSS10102155 Domain annotation for each sequence (and alignments): >> VIMSS10102155 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 281.3 2.1 5.2e-88 5.2e-88 1 327 [] 150 467 .. 150 467 .. 0.94 Alignments for each domain: == domain 1 score: 281.3 bits; conditional E-value: 5.2e-88 CCDC47 1 dfklEililallllyvllyfiGkrkNkklakkwl...kahkplleknFalvgfdeekeksllkeesesefttyatGRrnvasllvtlklkkRqdll 93 ++++Ei+++++l+ y ++yf+Gkr+N++la +w+ ++++eknF+l+g++e+++++ll++e+ + f++ya+GRr +++ll+tl+lk+R+dl+ VIMSS10102155 150 SYTVEIVCVSILIGYAINYFTGKRENENLALAWAskfGLKDTIFEKNFSLLGVGEGEDSPLLLKEATNVFKFYASGRRYCHGLLATLELKSRHDLI 245 69*******************************833355689****************************************************** PP CCDC47 94 slllelvlsfffesvkapkDrveitvylndgkestmdkfVfAivnKkemkklrkerydl.sltktkdnpk....lpeelvvmsEsaevtealltpe 184 s l+++v +++kD+++++vy+nd++ md++VfA+++Kk++k+++ke dl ++ +p + eel+v+sEs+ev+ +++t+ VIMSS10102155 246 SRLFNSV--------VPCKDEISFEVYMNDEA---MDHIVFAMARKKAAKTMHKELRDLqRFGGMVPSPGgrkwVTEELAVVSESKEVAGDMITDV 330 *******........679*************9...******************************9999989989989****************** PP CCDC47 185 ll......kalekagdlleyliitDqpsekPeteeetkprkrlilslklpssksdlealkpllelvleliDklakkkaklrpevlkkvkktReeve 274 +l k +ek+g+++ +++++Dq+ k +rk+l +++ lp ++++++ +l++l+ ++iD + ++kl++++++k++ +R++++ VIMSS10102155 331 VLdqvfgdKSFEKFGKYFISMHFSDQHPGK--------HRKMLLFKFALPDI-KHMDDMVRLIALIPYYIDLIG--RYKLSSQARNKTDGARQKAA 415 88889999******************9973........478*********55.58*******************..9******************* PP CCDC47 275 ekikkeaeeekaEeaqekkeekkkkereeklaklsaeeqrKleeKerkkeakK 327 ++ ke e+ ++E++q +k+++kkk ee akls+e+ rK e Ker++++kK VIMSS10102155 416 QEAYKELENVRQEALQ-RKKAEKKKILEEAQAKLSSEALRKKEAKERARQMKK 467 ****************.666666666666699********************9 PP
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