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Align VIMSS10102155 to PF07946 (CCDC47)

VIMSS10102155 has 478 amino acids

Query:       CCDC47  [M=327]
Accession:   PF07946.18
Description: PAT complex subunit CCDC47
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.4e-88  281.6   2.1    5.2e-88  281.3   2.1    1.1  1  VIMSS10102155  


Domain annotation for each sequence (and alignments):
>> VIMSS10102155  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  281.3   2.1   5.2e-88   5.2e-88       1     327 []     150     467 ..     150     467 .. 0.94

  Alignments for each domain:
  == domain 1  score: 281.3 bits;  conditional E-value: 5.2e-88
         CCDC47   1 dfklEililallllyvllyfiGkrkNkklakkwl...kahkplleknFalvgfdeekeksllkeesesefttyatGRrnvasllvtlklkkRqdll 93 
                    ++++Ei+++++l+ y ++yf+Gkr+N++la +w+      ++++eknF+l+g++e+++++ll++e+ + f++ya+GRr +++ll+tl+lk+R+dl+
  VIMSS10102155 150 SYTVEIVCVSILIGYAINYFTGKRENENLALAWAskfGLKDTIFEKNFSLLGVGEGEDSPLLLKEATNVFKFYASGRRYCHGLLATLELKSRHDLI 245
                    69*******************************833355689****************************************************** PP

         CCDC47  94 slllelvlsfffesvkapkDrveitvylndgkestmdkfVfAivnKkemkklrkerydl.sltktkdnpk....lpeelvvmsEsaevtealltpe 184
                    s l+++v        +++kD+++++vy+nd++   md++VfA+++Kk++k+++ke  dl ++     +p     + eel+v+sEs+ev+ +++t+ 
  VIMSS10102155 246 SRLFNSV--------VPCKDEISFEVYMNDEA---MDHIVFAMARKKAAKTMHKELRDLqRFGGMVPSPGgrkwVTEELAVVSESKEVAGDMITDV 330
                    *******........679*************9...******************************9999989989989****************** PP

         CCDC47 185 ll......kalekagdlleyliitDqpsekPeteeetkprkrlilslklpssksdlealkpllelvleliDklakkkaklrpevlkkvkktReeve 274
                    +l      k +ek+g+++ +++++Dq+  k        +rk+l +++ lp   ++++++ +l++l+ ++iD +   ++kl++++++k++ +R++++
  VIMSS10102155 331 VLdqvfgdKSFEKFGKYFISMHFSDQHPGK--------HRKMLLFKFALPDI-KHMDDMVRLIALIPYYIDLIG--RYKLSSQARNKTDGARQKAA 415
                    88889999******************9973........478*********55.58*******************..9******************* PP

         CCDC47 275 ekikkeaeeekaEeaqekkeekkkkereeklaklsaeeqrKleeKerkkeakK 327
                    ++  ke e+ ++E++q +k+++kkk  ee  akls+e+ rK e Ker++++kK
  VIMSS10102155 416 QEAYKELENVRQEALQ-RKKAEKKKILEEAQAKLSSEALRKKEAKERARQMKK 467
                    ****************.666666666666699********************9 PP



Or compare VIMSS10102155 to CDD or PaperBLAST