VIMSS6585783 has 404 amino acids
Query: CCDC47 [M=327]
Accession: PF07946.18
Description: PAT complex subunit CCDC47
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-84 269.3 6.6 2.8e-84 269.1 6.6 1.0 1 VIMSS6585783
Domain annotation for each sequence (and alignments):
>> VIMSS6585783
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 269.1 6.6 2.8e-84 2.8e-84 1 327 [] 44 394 .. 44 394 .. 0.95
Alignments for each domain:
== domain 1 score: 269.1 bits; conditional E-value: 2.8e-84
CCDC47 1 dfklEililallllyvllyfiGkrkNkklakkwlkahkpllekn..FalvgfdeekeksllkeesesefttyatGRrnvasllvtlklkkRqdllsl 95
++++E+++l++l+l++++y +G++ N k+ ++++++++++l+++ F++vgf+ +++k + +e+++++f+++atGR+ ++s++++l+l+ R +++s+
VIMSS6585783 44 NWTFELCALGVLFLVYAFYKFGNSVNLKRGNQIFQSLHSFLANDlkFSRVGFNINDSKIFTVEHQNTWFSSFATGRSAIKSINLNLHLVARSNPFSM 140
7******************************************999*******999***************************************** PP
CCDC47 96 llelvlsfffesv..kapkDrveitvylndgke................stmdkfVfAivnKkemkklrkerydlsltktkdnpklpeelvvmsEsa 174
+le++l+fff s+ k+ ++ +ei++ +n t+++fV++ivnK+ m+++r e+y+ls+++t++n+klp+++v+ms+++
VIMSS6585783 141 CLEYLLGFFFASLksKQLEEFMEIVIRPNG--IlvtsesahpnknaheiLTKFRFVTSIVNKEFMNQARTENYFLSIAHTSENDKLPNNFVYMSDVN 235
*************64555677888888864..367999*********************************************************** PP
CCDC47 175 evtealltpe.llkalekagdlleyliitDqpsekPeteee..tkprkrlilslklpssksdlealkpllelvleliDkla......kkkaklrpev 262
+++ ++++++ ++l++ag+ll+y+++tD+p++ P++++e ++ ++ i+++ +p+++++l+ l+++++lv+e++D ++ + ++ +++++
VIMSS6585783 236 QLSGFMFHYSkPYEVLSQAGNLLKYISFTDLPVNPPRDDKEweSSIEPKAIIRCAVPQNENELKLLNQIISLVVEIYDGFTqdlvqqSPNLFITNDI 332
*******998899*************************9996556669***********99******************9999*999899******* PP
CCDC47 263 lkkvkktReeveekikkeaeeekaEeaqekkeekkkkereeklaklsaeeqrKleeKerkkeakK 327
lk+++++R+++ +kikk ++e + E a+ekk e +k++r++ + +q+K+++K+++k++++
VIMSS6585783 333 LKRTTNLRQQELNKIKKFMKETELELAKEKKLELEKAKRRQLK---ASGQQEKVDQKMKEKRERR 394
***************************************9955...789***************8 PP
Or compare VIMSS6585783 to CDD or PaperBLAST