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Align VIMSS6586246 to PF07950 (MCP1_TM)

VIMSS6586246 has 302 amino acids

Query:       MCP1_TM  [M=105]
Accession:   PF07950.15
Description: MDM10-complementing protein 1, transmembrane domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      9e-32   96.2   1.4    7.2e-17   48.3   0.7    2.2  2  VIMSS6586246  


Domain annotation for each sequence (and alignments):
>> VIMSS6586246  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   46.6   0.0   2.4e-16   2.4e-16       2     101 ..      68     166 ..      67     169 .. 0.78
   2 !   48.3   0.7   7.2e-17   7.2e-17       1     102 [.     182     275 ..     182     278 .. 0.86

  Alignments for each domain:
  == domain 1  score: 46.6 bits;  conditional E-value: 2.4e-16
       MCP1_TM   2 llglHvlvnrivPllvegdsskvglayvahglarhpvlsllayaaLvgvgvlHivsGlakwlglapel.kkkkrrrrwliingi.aaavaalwlaGg 96 
                   +++lH+++++i+P+++ +ds++++++++++++    +   +++++Lv+ ++lH+ +G++  l + ++  k +++r+r l i++   +++++++l+Gg
  VIMSS6586246  68 YFPLHAANTLITPAVS-PDSAPDDVLMMVREI---LPS--ITTKLLVAGITLHVSAGVL--LRIVNNWnKPRRNRHRHLKISAEqDLSQDSIGLTGG 156
                   89**************.***************...777..9******************..5554444444444445555544314556******** PP

       MCP1_TM  97 .....Lgvvk 101
                        +g++k
  VIMSS6586246 157 isgylFGLYK 166
                   7777666666 PP

  == domain 2  score: 48.3 bits;  conditional E-value: 7.2e-17
       MCP1_TM   1 pllglHvlvnrivPllvegdsskvglayvahglarhpvl.....sllayaaLvgvgvlHivsGlakwlglapelkkkkrrrrwliingiaaavaalw 92 
                   p+l++H+l++++vP+ +   s++v++a++++ l +++ +     +l+++a+L+ +gv+Hi sGl++++g++   k+++r++       +++a++ l+
  VIMSS6586246 182 PVLIYHLLIMKWVPNSI---STEVDFASIKQLLSSKNRWwkwlgGLVPLAILLESGVYHIGSGLCRYFGVR---KMTSRKK-------WSTAINLLT 265
                   6799*************...*************988777688888899***********************...6566777.......777778888 PP

       MCP1_TM  93 laGgLgvvkr 102
                   l+G++++++ 
  VIMSS6586246 266 LVGFVSLIRL 275
                   8888777765 PP



Or compare VIMSS6586246 to CDD or PaperBLAST