VIMSS6586246 has 302 amino acids
Query: MCP1_TM [M=105] Accession: PF07950.15 Description: MDM10-complementing protein 1, transmembrane domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 9e-32 96.2 1.4 7.2e-17 48.3 0.7 2.2 2 VIMSS6586246 Domain annotation for each sequence (and alignments): >> VIMSS6586246 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 46.6 0.0 2.4e-16 2.4e-16 2 101 .. 68 166 .. 67 169 .. 0.78 2 ! 48.3 0.7 7.2e-17 7.2e-17 1 102 [. 182 275 .. 182 278 .. 0.86 Alignments for each domain: == domain 1 score: 46.6 bits; conditional E-value: 2.4e-16 MCP1_TM 2 llglHvlvnrivPllvegdsskvglayvahglarhpvlsllayaaLvgvgvlHivsGlakwlglapel.kkkkrrrrwliingi.aaavaalwlaGg 96 +++lH+++++i+P+++ +ds++++++++++++ + +++++Lv+ ++lH+ +G++ l + ++ k +++r+r l i++ +++++++l+Gg VIMSS6586246 68 YFPLHAANTLITPAVS-PDSAPDDVLMMVREI---LPS--ITTKLLVAGITLHVSAGVL--LRIVNNWnKPRRNRHRHLKISAEqDLSQDSIGLTGG 156 89**************.***************...777..9******************..5554444444444445555544314556******** PP MCP1_TM 97 .....Lgvvk 101 +g++k VIMSS6586246 157 isgylFGLYK 166 7777666666 PP == domain 2 score: 48.3 bits; conditional E-value: 7.2e-17 MCP1_TM 1 pllglHvlvnrivPllvegdsskvglayvahglarhpvl.....sllayaaLvgvgvlHivsGlakwlglapelkkkkrrrrwliingiaaavaalw 92 p+l++H+l++++vP+ + s++v++a++++ l +++ + +l+++a+L+ +gv+Hi sGl++++g++ k+++r++ +++a++ l+ VIMSS6586246 182 PVLIYHLLIMKWVPNSI---STEVDFASIKQLLSSKNRWwkwlgGLVPLAILLESGVYHIGSGLCRYFGVR---KMTSRKK-------WSTAINLLT 265 6799*************...*************988777688888899***********************...6566777.......777778888 PP MCP1_TM 93 laGgLgvvkr 102 l+G++++++ VIMSS6586246 266 LVGFVSLIRL 275 8888777765 PP
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