PaperBLAST – Find papers about a protein or its homologs

 

Align WP_038909824.1 to PF08020 (DUF1706)

WP_038909824.1 has 172 amino acids

Query:       DUF1706  [M=165]
Accession:   PF08020.15
Description: Protein of unknown function (DUF1706)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      8e-57  177.9   0.0      9e-57  177.7   0.0    1.0  1  WP_038909824.1  


Domain annotation for each sequence (and alignments):
>> WP_038909824.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.7   0.0     9e-57     9e-57       1     165 []       1     165 [.       1     165 [. 0.99

  Alignments for each domain:
  == domain 1  score: 177.7 bits;  conditional E-value: 9e-57
         DUF1706   1 MarpksKeeLieaieknfekliklidsipeeekre...eeavkgvdkslrdvlayllgWhklllkWveeeqegkkvelPeegykWnqlgelnqef 92 
                     M +p++K+eL+ ai+knf+kli  +++ip+e +     ++++kg+++s++++++yllgW++l++kW++ ++ g++v++Pe+gykWnqlg l+q+f
  WP_038909824.1   1 MGVPQTKSELLFAIDKNFTKLIGYLNAIPPELTADkslDGHAKGTEMSVCELVSYLLGWNTLVVKWISGDATGQPVDFPETGYKWNQLGLLAQKF 95 
                     899****************************998899********************************************************** PP

         DUF1706  93 ykkyqdlsleelleklkesheellelieslsdeeLfekkgrkWtgkwtlgkyiqsntsspyknarkkirkwkk 165
                     y +y+ l++++l ++l++ ++e+++li++ +de+L+   g +W+gkwt+g++i+ ntsspy+na  ++r+w k
  WP_038909824.1  96 YFDYKGLNYQTLINNLQSVKDEIVRLIDERTDEDLY---GKPWYGKWTMGRMISLNTSSPYANANGRLRQWAK 165
                     ************************************...********************************88 PP



Or compare WP_038909824.1 to CDD or PaperBLAST