PaperBLAST – Find papers about a protein or its homologs

 

Align WP_013997845.1 to PF08522 (DUF1735)

WP_013997845.1 has 440 amino acids

Query:       DUF1735  [M=120]
Accession:   PF08522.14
Description: Domain of unknown function (DUF1735)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-22   66.9  11.5    1.2e-17   51.0   3.9    3.6  3  WP_013997845.1  


Domain annotation for each sequence (and alignments):
>> WP_013997845.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.0   3.9   1.2e-17   1.2e-17       6     113 ..      36     148 ..      30     155 .. 0.81
   2 !   17.6   0.2   2.7e-07   2.7e-07      45     118 ..     182     271 ..     164     273 .. 0.66
   3 ?   -2.3   0.0      0.37      0.37      10      37 ..     346     377 ..     333     386 .. 0.53

  Alignments for each domain:
  == domain 1  score: 51.0 bits;  conditional E-value: 1.2e-17
         DUF1735   6 yieeaspsktltldeeelgdettislsvtvsgssp.kdvtvtlev.deslldeYnkangtnykllPedsytlessevtikaGsvssapvkiklkd 98 
                      +   +++++ +++ +++gd++++++++ +sg+ + +++++++ v de+ l+eY +  g++y+ lPed+y+++++++++ +  + +++ ++ +k+
  WP_013997845.1  36 LLL--KQTGEQEVTLYDTGDDGSYDVTIFKSGKLEqSTANASVRVlDEAELAEYSARVGKTYTGLPEDMYQVAQKDFDFGNT-DRYKKANVVFKT 127
                     444..4566777777788**************77757********9**************************9999999955.455555555555 PP

         DUF1735  99 ......ldkldgktYvlPlri 113
                           ++++ +k+YvlP+ +
  WP_013997845.1 128 dlirdfIKTNTDKNYVLPILL 148
                     55988777777*******976 PP

  == domain 2  score: 17.6 bits;  conditional E-value: 2.7e-07
         DUF1735  45 vtlevdeslldeYnkangtn........yk.......llPedsytle.ssevtikaGsvssapvkiklkdldkldgktYvlPlritsvsg 118
                     +t++  ++ l++Yn++ +          ++       ++ +d + +e  ++ ++k+Gs+ s+pv+ik+ +   + g++ +lP+++ s+++
  WP_013997845.1 182 ATVNLTNDNLATYNFTLNLPfvspwdfeCEialpekgVFSSDQVFFEnGNKAVFKKGSSISEPVQIKVAKVGDFVGNKAILPIKVISSTK 271
                     333335556666664333334444443311311112355666666775778*******************99999**********99876 PP

  == domain 3  score: -2.3 bits;  conditional E-value: 0.37
         DUF1735  10 aspsktltldee....elgdettislsvtvsg 37 
                     ++++k++ + ++    + g+ +++++ v+ +g
  WP_013997845.1 346 NESVKKIAFAYQnrnnNNGKPQEVKIWVSENG 377
                     34455555555544333344444555555555 PP



Or compare WP_013997845.1 to CDD or PaperBLAST