PaperBLAST – Find papers about a protein or its homologs

 

Align XP_011320109.1 to PF08550 (DUF1752)

XP_011320109.1 has 964 amino acids

Query:       DUF1752  [M=28]
Accession:   PF08550.14
Description: Fungal protein of unknown function (DUF1752)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.3e-16   44.3   0.2    1.6e-15   43.0   0.2    1.7  1  XP_011320109.1  


Domain annotation for each sequence (and alignments):
>> XP_011320109.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.0   0.2   1.6e-15   1.6e-15       1      27 [.     114     140 ..     114     141 .. 0.97

  Alignments for each domain:
  == domain 1  score: 43.0 bits;  conditional E-value: 1.6e-15
         DUF1752   1 lWkvytkckdslpngeRLENlSWRlWn 27 
                     +Wk+++k+k++lp ++R+ENl+WR+++
  XP_011320109.1 114 VWKFFAKTKQQLPSQHRMENLTWRMMA 140
                     6*************************8 PP



Or compare XP_011320109.1 to CDD or PaperBLAST