PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::Q7MGG3 to PF08719 (NADAR)

SwissProt::Q7MGG3 has 367 amino acids

Query:       NADAR  [M=163]
Accession:   PF08719.15
Description: NADAR domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.1e-41  129.0   0.1    1.8e-41  128.3   0.1    1.4  1  SwissProt::Q7MGG3  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q7MGG3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  128.3   0.1   1.8e-41   1.8e-41       1     163 []      22     161 ..      22     161 .. 0.97

  Alignments for each domain:
  == domain 1  score: 128.3 bits;  conditional E-value: 1.8e-41
              NADAR   1 fFykeeeepygvfsnfspseftvegeeesvkleeltyptaehymmaqKallfkdeeaaekilaakspkeakalgrkvrnfdeedWeevkeev 92 
                        +Fy++ +e++g++ nf+p+++tv+g+          +p++ehy++aqK   f d + +ek+l+a+++++a +l+r+ ++++++dW + ++ev
  SwissProt::Q7MGG3  22 YFYEP-DENHGFLANFYPCSITVSGTC---------WPSSEHYYQAQK---FDDVRLQEKVLRAEDAAQAFRLSREYQQWQRHDWYDIRVEV 100
                        8***9.55***************9999.........************...***********888*************************** PP

              NADAR  93 veegnlaKFtqneelrelLlaTgdreLveasprDriWGiGlkaddaaenrekwkGeNlLGkaLmevReeLr 163
                        ++ ++ +KF qn  l ++LlaTgd+eL e+s +D++WG G   d        ++G+N+LG++Lm vReeL+
  SwissProt::Q7MGG3 101 MRFIVREKFLQNTPLAHQLLATGDTELKEHSHKDAFWGDG--GD--------GHGRNELGRILMMVREELQ 161
                        ****************************************..66........78***************95 PP



Or compare SwissProt::Q7MGG3 to CDD or PaperBLAST