YP_009345041.1 has 2708 amino acids
Query: NADAR [M=163] Accession: PF08719.15 Description: NADAR domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.3e-28 84.8 0.0 1.3e-27 83.2 0.0 1.9 1 YP_009345041.1 Domain annotation for each sequence (and alignments): >> YP_009345041.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 83.2 0.0 1.3e-27 1.3e-27 3 162 .. 1076 1227 .. 1074 1228 .. 0.86 Alignments for each domain: == domain 1 score: 83.2 bits; conditional E-value: 1.3e-27 NADAR 3 ykeeeepygvfsnfspseftvegeeesvkleeltyptaehymmaqKallfkdeeaaekilaakspkeakalgrkvrnfde.edWeevkeevve 94 y+ ++++fsnf++ e+ + + l++++aeh +++ Ka+++++ aeki ++k+ ak+lg++++ +e ++W v+e+v++ YP_009345041.1 1076 YS----SKSPFSNFYEIELDFLV-----SGRLLKFRSAEHAYQYLKAIHLGQLLLAEKIKNSKTSLMAKKLGKSLNYLKEsTTWMCVRESVMY 1159 54....5789*****66443322.....335699**************************989**********7666554279********** PP NADAR 95 egnlaKFtqneelrelLlaTgdreLveasprDriWGiGlkadda.aenrekwkGeNlLGkaLmevReeL 162 +++ +KF+q+++l+ lL +T + L ++ D++WGiGl++ +a +++ +G+N +G +Lm+ R++L YP_009345041.1 1160 DVISTKFRQHPSLNLLLEKTYPMPLMHT-VSDSYWGIGLSHYSAsKKSSLVSSGSNIMGCLLMKYRDTL 1227 *************************975.69*********9988555677788*************998 PP
Or compare YP_009345041.1 to CDD or PaperBLAST