VIMSS2061415 has 311 amino acids
Query: HamA [M=230]
Accession: PF08878.15
Description: HamA
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.1e-62 195.1 10.0 1.1e-61 194.7 10.0 1.2 1 VIMSS2061415
Domain annotation for each sequence (and alignments):
>> VIMSS2061415
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 194.7 10.0 1.1e-61 1.1e-61 2 230 .] 37 288 .. 36 288 .. 0.97
Alignments for each domain:
== domain 1 score: 194.7 bits; conditional E-value: 1.1e-61
HamA 2 elakflanniveyalsrseieklkkeeakelsekaaskfrk....................dklsksGelGEllLyllleeflnapkllsKlelkts 78
+ ++++n+i+ +al+r++ +++++e+ +e +++ +++++ dk+ k+Ge+GEl+Ly+ll+e l+ p+l+sKl++k+s
VIMSS2061415 37 GWIEEIFNSIPFFALGRDKAMEICEESPREAVRQGLKLLYDikeireankeyltnpklkfdDKYLKRGEFGELILYYLLQEKLGKPQLISKLYFKDS 133
5899*****************************8888888888888888888889999999************************************ PP
HamA 79 snmevkgaDgvhikidddgklqLwlGeSKlysdlkdaisdaveslkkflnedslekelqlisnklddedeelaealkklldpstslddknveinfvi 175
n v+g+D+vh++++++ +Lw+GeSK+y+d ++a++d++++l+k++n d++++e+ +i++++ d +++++++l dp+t+l +k ++in ++
VIMSS2061415 134 YNSVVHGFDAVHFDKISK---ELWIGESKFYKDKNSALRDLADDLNKHFNIDFFNQEFTIIKRRFGDL-SVQDDDISSLVDPETKLLSKIININACF 226
*****************9...9**********************************************.9*************************** PP
HamA 176 ligydsdilkklke......esdeykdeikeeiknkakkvkk.rikkeklkkikihvfllPv 230
++++ds+i ++++ s+e+ d +k+ +++++ +++k +++ ++ +k+kih+fl+Pv
VIMSS2061415 227 FALFDSKIVNSFSYesgtdnPSQEFLDVLKKAVEKTKFDFDKkISTYPYKDKLKIHLFLFPV 288
************999***************************9999***************7 PP
Or compare VIMSS2061415 to CDD or PaperBLAST