PaperBLAST – Find papers about a protein or its homologs

 

Align D5GXS8 to PF08924 (Rv2525c_GlyHyd-like)

D5GXS8 has 385 amino acids

Query:       Rv2525c_GlyHyd-like  [M=198]
Accession:   PF08924.15
Description: Rv2525c-like, glycoside hydrolase-like domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.2e-11   28.5   2.7    1.4e-10   27.7   2.7    1.5  1  D5GXS8    


Domain annotation for each sequence (and alignments):
>> D5GXS8  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.7   2.7   1.4e-10   1.4e-10      39     165 ..      65     214 ..      50     284 .. 0.69

  Alignments for each domain:
  == domain 1  score: 27.7 bits;  conditional E-value: 1.4e-10
  Rv2525c_GlyHyd-like  39 laaGlrlvpiyqggq........................deaadftraaaqGvadAadAvaaakalGfpagspIYfaVDldaydsev... 101
                          ++aG +++++ +  +                           a f+ + ++++++A+ A++ akalG+pags + +  D++  + ++   
               D5GXS8  65 AKAGSQFAIVKVSEGtsyrnpkaanqiksaiandmmpmaYHFATFSSSSSAAKREAQYAISSAKALGLPAGSYLAC--DYETGQGNIitn 152
                          55666666555555566666666666666666666666655667999999**********************5555..**********99 PP

  Rv2525c_GlyHyd-like 102 .taavlpYfrgwqealgaagykvGvYgsrnvck................fvsdmstgfsgnlyplpdnWageaglgeelpq 165
                           ++ +++ + ++ ++++aagy++ +Y+s++v +                +v+                   +  +++ + q
               D5GXS8 153 gKNVTAKAIIAFMDQIKAAGYQPLLYASSSVLQnnintpsivnkypnslWVA-------------------AYAISGRVDQ 214
                          9888999999999999***************885555555444444444222...................2222222322 PP



Or compare D5GXS8 to CDD or PaperBLAST