PaperBLAST – Find papers about a protein or its homologs

 

Align Q8SXQ8 to PF08925 (DUF1907)

Q8SXQ8 has 322 amino acids

Query:       DUF1907  [M=285]
Accession:   PF08925.15
Description: Domain of Unknown Function (DUF1907)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
   5.9e-120  386.0   0.0   6.7e-120  385.8   0.0    1.0  1  Q8SXQ8    


Domain annotation for each sequence (and alignments):
>> Q8SXQ8  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  385.8   0.0  6.7e-120  6.7e-120       2     285 .]      31     310 ..      30     310 .. 0.98

  Alignments for each domain:
  == domain 1  score: 385.8 bits;  conditional E-value: 6.7e-120
  DUF1907   2 qkaLkknfeevsvsvvdcPDLrkaPfklaaeglcgkeriadvGgvpyLlPlvkldkvydlkelakkieeeekafliGagagpfkvvgvncelianlsveeek 103
              q aL++nf++v+vsv+ cPDLr++ f l+++gl+gk+++++ Gg+pyL Plv++dk+y+lke+++++++  k+f +G+gagp+++ ++nce i+n+s++ee+
   Q8SXQ8  31 QGALDENFRTVDVSVEACPDLRDSQFGLVERGLGGKATLLEAGGPPYLRPLVQRDKLYNLKEITRRTQGAGKIFAVGPGAGPWPIRHSNCEGIFNFSLNEED 132
              789***********************************************************************************************6666 PP

  DUF1907 104 kkvkngsrvakvekedekvvllekleksesdtrfallaNlfvsegkpgkvlkvkakkrtgkksfvecirkaLekaygdkvvglgGvflikkGkaklHvmpdf 205
               ++++gs++a+v+ ++e++v le+++++e   r+al+ Nlf+segkpg+vl+++ak+rtg ++fvecirk+Le++ygd+vvglgG+f++++G++++Hvm+df
   Q8SXQ8 133 -ELTQGSYTATVRGANEDCV-LERIPETE--SRAALILNLFLSEGKPGQVLRISAKQRTGGENFVECIRKGLERHYGDQVVGLGGMFVVRRGCVHQHVMRDF 230
              .9**************9965.599**998..778******************************************************************** PP

  DUF1907 206 sklplkseeevnkWLkfyelkaplvalgvlvskdpgldLrleHtHcfseegegGHYhydttpdeveYegYfnvaeklyri 285
              sk+p++++e++++WLkfye+ a+l a+g+lv+kd+gldLrl+H+H+fs +++gGHYhydttpd veYe+Y+nvae+++r+
   Q8SXQ8 231 SKTPIHTQEQIQNWLKFYEMPAQLNAVGTLVTKDMGLDLRLQHFHSFSFANWGGHYHYDTTPDIVEYEAYLNVAERVIRV 310
              *******************************************************************************8 PP



Or compare Q8SXQ8 to CDD or PaperBLAST