PaperBLAST – Find papers about a protein or its homologs

 

Align P44842 to PF09186 (DUF1949)

P44842 has 206 amino acids

Query:       DUF1949  [M=56]
Accession:   PF09186.15
Description: Domain of unknown function (DUF1949)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.5e-17   49.6   0.0    2.5e-17   48.9   0.0    1.4  1  P44842    


Domain annotation for each sequence (and alignments):
>> P44842  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   48.9   0.0   2.5e-17   2.5e-17       1      56 []     141     196 ..     141     196 .. 0.98

  Alignments for each domain:
  == domain 1  score: 48.9 bits;  conditional E-value: 2.5e-17
  DUF1949   1 ltcdYaqlgklqrlLeqfgatildeeYtddVtltvevpeeeveafkqaLteltsGr 56 
              l cdY ql ++q l+e+++++il++ ++++++l++ + e  +eaf+++Lte +sGr
   P44842 141 LDCDYGQLRLVQQLCEKYQVEILSQGFQANIHLILGISEKTIEAFSSELTEKSSGR 196
              57*****************************************************8 PP



Or compare P44842 to CDD or PaperBLAST