PaperBLAST – Find papers about a protein or its homologs

 

Align A5PK91 to PF09291 (DUF1968)

A5PK91 has 272 amino acids

Query:       DUF1968  [M=81]
Accession:   PF09291.14
Description: Domain of unknown function (DUF1968)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.3e-40  122.8   0.6    4.9e-40  121.8   0.6    1.6  1  A5PK91    


Domain annotation for each sequence (and alignments):
>> A5PK91  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.8   0.6   4.9e-40   4.9e-40       1      80 [.     138     221 ..     138     222 .. 0.97

  Alignments for each domain:
  == domain 1  score: 121.8 bits;  conditional E-value: 4.9e-40
  DUF1968   1 PavYqLkspkssdtsvCLfTDFds.qvnvsq...skeseviktdktvldmksldsKSngavaWsnksdfkCqdtfkeetaflss 80 
              P+vYqL+sp+ssdtsvCLfTDFds qvn+++   s+ s+v+kt++tvl+m++l+sKSng+v+W+n+sd++C++tf+e+ +f+ss
   A5PK91 138 PTVYQLRSPQSSDTSVCLFTDFDSnQVNMEKimgSEGSTVHKTNSTVLNMEILGSKSNGIVTWGNTSDAGCEYTFNETIPFASS 221
              9****************************99887788********************************************998 PP



Or compare A5PK91 to CDD or PaperBLAST