PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS16761 to PF09400 (DUF2002)

VIMSS16761 has 114 amino acids

Query:       DUF2002  [M=110]
Accession:   PF09400.14
Description: Protein of unknown function (DUF2002)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.8e-69  215.6   0.3    5.3e-69  215.4   0.3    1.0  1  VIMSS16761  


Domain annotation for each sequence (and alignments):
>> VIMSS16761  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.4   0.3   5.3e-69   5.3e-69       1     110 []       1     110 [.       1     110 [. 1.00

  Alignments for each domain:
  == domain 1  score: 215.4 bits;  conditional E-value: 5.3e-69
     DUF2002   1 mylrpdevarvlekaGferdvvtkkayGyrkGenyvyvnrearlGrtalvihpalkdkssllaepaseiktsdkyqefplylvGesdehyGiahGfssr 99 
                 mylrpdevarvlek+Gf++dvvt+kayGyr+Genyvyvnrear+Grtalvihp+lk++ss+laepas+ikt+d+yq+fplyl+Ge++ehyGi+hGfssr
  VIMSS16761   1 MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSR 99 
                 9************************************************************************************************** PP

     DUF2002 100 aalerylqklf 110
                 +aleryl++lf
  VIMSS16761 100 VALERYLNGLF 110
                 *********98 PP



Or compare VIMSS16761 to CDD or PaperBLAST