NP_057088.2 has 437 amino acids
Query: ABC_transp_aux [M=266]
Accession: PF09822.13
Description: ABC-type uncharacterized transport system
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.7e-14 38.9 0.1 6.7e-14 38.0 0.1 1.5 1 NP_057088.2
Domain annotation for each sequence (and alignments):
>> NP_057088.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 38.0 0.1 6.7e-14 6.7e-14 160 266 .] 19 116 .. 1 116 [. 0.82
Alignments for each domain:
== domain 1 score: 38.0 bits; conditional E-value: 6.7e-14
ABC_transp_aux 160 sds.seladlleelsenyeveevdldseae.lpeevdvlviakptkalseeekyaldqflmnGgkllvlldpvaveldslkealaaprdsnledl 252
++ + ++++++l++n ++++++ + ++e l ++v++ + a+p+++++ +e + l+++l+ Gg ++v+l ++ d+n++ l
NP_057088.2 19 FTTnNGYKSMQKKLRSNWKIQSLKDEITSEkL-NGVKLWITAGPREKFTAAEFEILKKYLDTGGDVFVMLGEGGESR----------FDTNINFL 102
33332235689***********9988777645.9*************************************998533..........59****** PP
ABC_transp_aux 253 LekyGvrinpdlVl 266
Le+yG+ +n+d V+
NP_057088.2 103 LEEYGIMVNNDAVV 116
***********996 PP
Or compare NP_057088.2 to CDD or PaperBLAST