Q2SDB0 has 978 amino acids
Query: ABC_transp_aux [M=266]
Accession: PF09822.13
Description: ABC-type uncharacterized transport system
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-62 198.0 5.6 2.2e-35 108.5 0.2 2.4 3 Q2SDB0
Domain annotation for each sequence (and alignments):
>> Q2SDB0
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 92.4 0.2 1.7e-30 1.7e-30 1 143 [. 280 433 .. 280 439 .. 0.95
2 ! 108.5 0.2 2.2e-35 2.2e-35 19 266 .] 442 692 .. 440 692 .. 0.86
3 ? -4.0 0.1 0.44 0.44 86 131 .. 836 879 .. 826 891 .. 0.49
Alignments for each domain:
== domain 1 score: 92.4 bits; conditional E-value: 1.7e-30
ABC_transp_aux 1 RlDlTedkrytLseatkellksleepvtitvylsgdllpaelkrlqkevrelLeeyaaysngkikvefidpeeeseeeeeaeallgiqpteieve 95
R+DlT+ ++y++++at+++l++l+ep+ ++ y+s + + l l ++r+l++ey+ ++++k++vef+dp++++e e+ea+ + i+p++++v+
Q2SDB0 280 RADLTDGNLYSINDATRDYLSQLQEPLLVRGYFSAK-THPLLAPLVPQLRDLIKEYEVAGGDKVRVEFVDPQSNPELEDEANNKYSIRPVPFQVS 373
99**********************************.57788889************************************************** PP
ABC_transp_aux 96 engk.ssqervypgavisygdkeevipllkn............nseenlEyeltsaikklt 143
++ + s ++ y+ ++isygd+ ev+ + + + n Ey++t+aikk+
Q2SDB0 374 DKYQaSL-VNSYFNVLISYGDQFEVLGFRDLievkdrnesdldVRLRNPEYDITKAIKKVL 433
9888555.*****************99988899*********978889**********985 PP
== domain 2 score: 108.5 bits; conditional E-value: 2.2e-35
ABC_transp_aux 19 llksleepvtitvylsgdl.lpaelkrlqkevrelLeeyaaysngkikvefidpeees.eeeeeaeallgiqpteieveengkssqervypgavi 111
l++ ++ pv+++ y+s+ + lp+el+ l+++++++L ++++sngk+++e dp+ + +++ ++ +g+qp++ + s++r+y+++++
Q2SDB0 442 LFATINTPVKLNGYVSSAQqLPPELQTLAQDLNDVLADIKQESNGKFSYELQDPNAGDgSLAQQIQQDFGMQPMTTSLL-----SDDRFYFYLLM 531
77899**************************************************98842333333446****777666.....369******** PP
ABC_transp_aux 112 sygdkeevipllknnseenlEyeltsaikkltkkekpkigvltghgelsds.........seladlleelsenyeveevdldseaelpeevdvlv 197
+ ++ + i l ++ + e l ++ s +k+ + +++++++ ++ + ++++l ++l e v+++dl+++ +pe+ d+l+
Q2SDB0 532 NDSKQYVQIALPDSLDKEGLKRNIESGLKRFSAGFTKTLALVVPESDADPYmqqfgqqssPSFKTLRDKLMETMTVKTIDLKDGL-VPEDADILM 625
9999999999999999**************************95555444245555555545566667777777********666.59******* PP
ABC_transp_aux 198 iakptkalseeekyaldqflmnGgkllvlldpvaveldslkealaaprdsnledlLekyGvrinpdlVl 266
+a +++ls+++++a+dqflm+Gg +l+ ++p++ + s + a + +s+le +L++yG+ + +++Vl
Q2SDB0 626 LA-APESLSDKQLFAVDQFLMKGGTVLLSTSPYQTRMTSSS-LTAGKHTSGLETWLQNYGINLAQSMVL 692
**.899****************************9996666.557777*****************9996 PP
== domain 3 score: -4.0 bits; conditional E-value: 0.44
ABC_transp_aux 86 giqpteieveengk.ssqervypgavisygdkeevipllknnseenl 131
+ pte ++ +++ ++ e+ +g vi + +++ i l+++ +e+l
Q2SDB0 836 DQAPTEGGQAAQQDdKA-EKTHFGGVIDKSPESARIILFSS--NEFL 879
34455555554444366.55556666665555544444444..2444 PP
Or compare Q2SDB0 to CDD or PaperBLAST