VIMSS5652390 has 493 amino acids
Query: ABC_transp_aux [M=266]
Accession: PF09822.13
Description: ABC-type uncharacterized transport system
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.7e-45 140.5 0.0 4.7e-45 140.2 0.0 1.1 1 VIMSS5652390
Domain annotation for each sequence (and alignments):
>> VIMSS5652390
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 140.2 0.0 4.7e-45 4.7e-45 1 266 [] 29 287 .. 29 287 .. 0.90
Alignments for each domain:
== domain 1 score: 140.2 bits; conditional E-value: 4.7e-45
ABC_transp_aux 1 RlDlTedkrytLseatkellksleepvtitvylsgdllpaelkrlqkevrelLeeyaaysngkikvefidpeeeseeeeeaeallgiqpteieve 95
R+DlT++++y+Ls +t +l++s+e++v+it+++s d + + + +vr+lL+eya++ +++ v + d++ s ++ +++ lg+ +++++ +
VIMSS5652390 29 RCDLTAQRAYSLSAHTIKLFESVESTVEITWFYSTD-V-DRYIPTVIYVRDLLKEYAHQLSKQCAVAMKDINLLS--QSLRKE-LGFVARRVTYT 118
99**********************************.4.55666899*************************999..778888.6********** PP
ABC_transp_aux 96 engkssqervypgavisygdkeevipllknnseenlEyeltsaikkltkke.....kpkigvltghgelsdsseladlleelse.nyeveevdld 184
+n++s+ +y+ ++++y++ +++p++++ +++lEy+++++i +++++ ++ i+vl + ls++ + a +l l++ + e ++++
VIMSS5652390 119 RNTASIAYDAYSAILVEYRGMARAVPFVSD--TKRLEYDIARLIIQMQQEMsadmmSRGIYVLAPPESLSTT-Y-AHVLPRLQSeGLLPEILSIS 209
9888889***********************..566***************9888888999***988888886.5.88999999978877777777 PP
ABC_transp_aux 185 seaelpeevdvlviakptkalseeekyaldqflmnGgkllvlldpvavel.dslkealaaprdsnledlLekyGvrinpdlVl 266
+ ++++ +++ ++ +e+++ ld+fl++Gg++l+++++++v+l d++ ++ +r++ l +lL++yG++in+dl+l
VIMSS5652390 210 LPQL---DTRIPLLILGSGYVDEHAVTLLDAFLQKGGNALCFVSGNSVQLnDQWT--VEEKRHDFLINLLSTYGITINSDLIL 287
5554...6777777778********************************977776..78889*******************96 PP
Or compare VIMSS5652390 to CDD or PaperBLAST