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Align VIMSS60120 to PF09822 (ABC_transp_aux)

VIMSS60120 has 615 amino acids

Query:       ABC_transp_aux  [M=266]
Accession:   PF09822.13
Description: ABC-type uncharacterized transport system
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    5.2e-75  238.4   0.0    1.2e-74  237.2   0.0    1.6  2  VIMSS60120  


Domain annotation for each sequence (and alignments):
>> VIMSS60120  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.2   0.0   1.2e-74   1.2e-74       1     266 []      33     301 ..      33     301 .. 0.93
   2 ?   -2.9   0.1       0.2       0.2     204     219 ..     542     557 ..     513     580 .. 0.70

  Alignments for each domain:
  == domain 1  score: 237.2 bits;  conditional E-value: 1.2e-74
  ABC_transp_aux   1 RlDlTedkrytLseatkellksleepvtitvylsgdl..lpaelkrlqkevrelLeeyaaysngkikvefidpeeeseeeeeaeallgiqpteie 93 
                     RlDlTe+k+yt+s++tk++l++l+ep+++++++s++     ++l++++++v+elL+ y++++ng+i++++idpe++se+e++a++ +g+q ++++
      VIMSS60120  33 RLDLTEQKLYTISPGTKRILAGLDEPINLYFFYSDSGarELVPLRNYARRVEELLRAYEREANGRIRLQVIDPEPFSENEDKATE-FGLQGIPLQ 126
                     9***********************************9995578******************************************.7******** PP

  ABC_transp_aux  94 veengkssqervypgavis.ygdkeevipllknnseenlEyeltsaikkltkkekpkigvlt.....ghgelsds..seladlleelsenyevee 180
                     + +      +++y+g++ s + d  +vip++  ++ee+lEy++++++++l+++++p++g+++     g  ++ +   ++ ++++ee+++++++++
      VIMSS60120 127 QGG------DNLYFGLAGSnALDGVQVIPFFPLDQEEFLEYDISRLVQTLAQPQRPVVGLMSslplnGGFDMASRqpTSPWMVMEEIRQQFDLRS 215
                     **8......9********999****************************************9777664444444489677*************** PP

  ABC_transp_aux 181 vdldseaelpeevdvlviakptkalseeekyaldqflmnGgkllvlldpvaveldslk..ealaaprdsnledlLekyGvrinpdlVl 266
                     ++ d++++ p+ev+vl+++ ++k+l+e+++ya+dqf+++Ggkll+++dp+++ + +     +l  +++s+l +l+e++G+r+ p+ Vl
      VIMSS60120 216 LKSDATEI-PPEVSVLLLV-HPKQLPEQTLYAIDQFVLRGGKLLAFVDPFSEADSGSDfaATLDGDKSSDLAPLFEAWGLRLLPGKVL 301
                     ****8887.9*********.*******************************9883333677999999***************999885 PP

  == domain 2  score: -2.9 bits;  conditional E-value: 0.2
  ABC_transp_aux 204 alseeekyaldqflmn 219
                     +l++e++  ++q++++
      VIMSS60120 542 ELTPEQQATVRQYMQE 557
                     4566666666666654 PP



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