PaperBLAST – Find papers about a protein or its homologs

 

Align WP_011213261.1 to PF09836 (DUF2063)

WP_011213261.1 has 271 amino acids

Query:       DUF2063  [M=83]
Accession:   PF09836.13
Description: Putative DNA-binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-20   60.1   0.0    1.8e-20   59.3   0.0    1.4  1  WP_011213261.1  


Domain annotation for each sequence (and alignments):
>> WP_011213261.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.3   0.0   1.8e-20   1.8e-20       1      83 []       6     100 ..       6     100 .. 0.93

  Alignments for each domain:
  == domain 1  score: 59.3 bits;  conditional E-value: 1.8e-20
         DUF2063   1 elqqaFaaalrdpd.........pglsaar.rlavYrnnvfnnlieaLaaaFpvlrallgeeffdalarafvr..ehpprspllreyGeeFpdfL 83 
                     ++q+ F++++++++         p++++++ r+++Yrn++++nl++ L+ +Fp++++l+g+ + d la +f++  ++ p++ +l+++Ge+Fp fL
  WP_011213261.1   6 QIQEFFLNTVLNQQdtaifkyfcPNEITNEfRFDIYRNTILQNLRHSLEMTFPAIWKLVGKGCADGLALHFIQdkNNLPTTNCLDDWGEKFPLFL 100
                     68999******8889****999966666667*****************************************966788**************998 PP



Or compare WP_011213261.1 to CDD or PaperBLAST