PaperBLAST – Find papers about a protein or its homologs

 

Align WP_011216157.1 to PF09836 (DUF2063)

WP_011216157.1 has 262 amino acids

Query:       DUF2063  [M=83]
Accession:   PF09836.13
Description: Putative DNA-binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-22   66.5   0.0    1.7e-22   65.8   0.0    1.4  1  WP_011216157.1  


Domain annotation for each sequence (and alignments):
>> WP_011216157.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.8   0.0   1.7e-22   1.7e-22       2      82 ..       7      97 ..       6      98 .. 0.89

  Alignments for each domain:
  == domain 1  score: 65.8 bits;  conditional E-value: 1.7e-22
         DUF2063  2 lqqaFaaalrdpd..........pglsaarrlavYrnnvfnnlieaLaaaFpvlrallgeeffdalarafvrehpprspllreyGeeFpdf 82
                    lq++F++ + +++          +  s++ rl++Y++ ++ +lie+Laa++p+l a+lg e+f++l +++++++p+   ++r+yG+++p+ 
  WP_011216157.1  7 LQTQFQEFIYSGQgsieesivptKLVSTEMRLNIYKDGYRLRLIECLAANYPALYAYLGTEEFAKLSARYIDSYPSAYRSIRWYGDRLPEL 97
                    8*********77788887777644444444***********************************************************96 PP



Or compare WP_011216157.1 to CDD or PaperBLAST