VIMSS60937 has 263 amino acids
Query: DUF2135 [M=48]
Accession: PF09906.13
Description: Uncharacterized protein conserved in bacteria (DUF2135)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.4e-25 73.0 1.4 2.7e-23 68.2 0.1 2.8 3 VIMSS60937
Domain annotation for each sequence (and alignments):
>> VIMSS60937
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.4 0.0 0.3 0.3 22 28 .. 59 65 .. 44 66 .. 0.62
2 ! 2.8 0.0 0.0071 0.0071 13 35 .. 164 184 .. 163 186 .. 0.84
3 ! 68.2 0.1 2.7e-23 2.7e-23 1 48 [] 193 248 .. 193 248 .. 0.96
Alignments for each domain:
== domain 1 score: -2.4 bits; conditional E-value: 0.3
DUF2135 22 gpttlrl 28
++tt+r+
VIMSS60937 59 QATTARI 65
6788887 PP
== domain 2 score: 2.8 bits; conditional E-value: 0.0071
DUF2135 13 ygnrqqtlagpttlrltlitdEG 35
ygn +la+ tl ++++t++G
VIMSS60937 164 YGN--RSLANGATLDVDVTTGYG 184
665..6788889**********9 PP
== domain 3 score: 68.2 bits; conditional E-value: 2.7e-23
DUF2135 1 alkGkYkVyVNYyg........nrqqtlagpttlrltlitdEGtpnekrqtfvvrl 48
++kG+Y+VyVNY+g q +++tt+r+tl+t+EGtpnek++tf v++
VIMSS60937 193 PQKGPYLVYVNYFGggygssedGAEQAAQDLTTARITLVTEEGTPNEKQETFLVPM 248
89*******************95569999**************************9 PP
Or compare VIMSS60937 to CDD or PaperBLAST