VIMSS148675 has 319 amino acids
Query: LpxR [M=322]
Accession: PF09982.13
Description: Outer membrane protein LpxR
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.7e-42 130.1 1.3 8.5e-42 129.3 1.3 1.4 1 VIMSS148675
Domain annotation for each sequence (and alignments):
>> VIMSS148675
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 129.3 1.3 8.5e-42 8.5e-42 19 319 .. 34 318 .. 9 319 .] 0.82
Alignments for each domain:
== domain 1 score: 129.3 bits; conditional E-value: 8.5e-42
LpxR 19 ekstlslqleNDlfagegsDr.yYTnGlrlswlsaeeekkwlrelarllkplsksaesekrlglslgQkiyTPsdieaedpdp..dDrPYAGylylel 113
++++++ N l+++ + Dr +YT+Gl+l + ++ +++ ++l++ ++Q iy Ps ++++p++ Dr + ++l+++l
VIMSS148675 34 DAGIFQPS-LNALYGHPAADRgDYTAGLFLGYSHDLTDA--------------------SQLSFHIAQDIYSPSGANKRKPEAvkGDRAFSAFLHTGL 110
44444433.377788776676369999999987766555....................3699**********8877777765559************ PP
LpxR 114 glqsetkde.ldslelslGvvGpaslaeqvQklvHkligseepkGWdnQlknepavnlsyerekrllekeadsgleldliphagaalGnvkteasagl 210
+s ++ + +l+ ++Gv+Gp++++++vQ+ H++ig e+ W+ Q++n ++ ++++ + l+ + g+++ + p+++a Gn++++++ g+
VIMSS148675 111 EWNSLATNWlRYRLGTDIGVIGPDAGGQEVQNRAHRIIGAEKYPAWQDQIENRYG--YTAKGMVSLTPAIDILGVNVGFYPEVSAVGGNLFQYLGYGA 206
*********889*****************************************98..577888888889999************************** PP
LpxR 211 tlRlGknLpkdfgsa....rirpgseafap......skskfgwyvFagaegryvarditLdGntfr.dspsvdkeplvadlelGvalaykrvrlsytl 297
t+ lG+ +k f+s+ + + +k++ + vFag+e r v +++tL+G+t + + ++vd+++ v ++++G+ + y+ v +s++l
VIMSS148675 207 TVALGN--DKTFNSDngfgLL-------SRrglihtQKEGLIYKVFAGVERREVDKNYTLQGKTLQtKMETVDINKTVDEYRVGATIGYSPVAFSLSL 295
*****9..9999998433222.......2223334489****************************7777**************************** PP
LpxR 298 vfrtkefeeqeead.qfGslsls 319
+ t+ef++ ++ + G ++++
VIMSS148675 296 NKVTSEFRTGDDYSyINGDITFF 318
********996655577777765 PP
Or compare VIMSS148675 to CDD or PaperBLAST