VIMSS3346230 has 454 amino acids
Query: MPAB_Lcp_cat [M=230]
Accession: PF09995.13
Description: ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.1e-15 41.9 7.1 6.1e-15 41.9 7.1 2.7 3 VIMSS3346230
Domain annotation for each sequence (and alignments):
>> VIMSS3346230
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 2.3 0.8 0.0079 0.0079 139 178 .. 35 87 .. 17 114 .. 0.72
2 ! 41.9 7.1 6.1e-15 6.1e-15 27 175 .. 164 329 .. 148 381 .. 0.76
3 ? -0.7 0.1 0.065 0.065 90 123 .. 367 401 .. 354 412 .. 0.79
Alignments for each domain:
== domain 1 score: 2.3 bits; conditional E-value: 0.0079
MPAB_Lcp_cat 139 prdvpatraefeaywdamlrpelevtpearellddl..............rklp 178
+ ++ ++r++ + w ++ + ++ t+++r l+d+l rk+p
VIMSS3346230 35 DSMWTQSRRDILEPWMDF-HEVPRETDRTRLLADHLwqgdelmdavvdriRKMP 87
678999999999999999.49999999999999999988866655544443333 PP
== domain 2 score: 41.9 bits; conditional E-value: 6.1e-15
MPAB_Lcp_cat 27 vgaGvadhsrf.adplgRlrrTltyvatvtygt....geeaealaerVrrlHarvrgtddsg......rryg.aldpelllwvhatlvdsfl...da 108
v++++ +rf d l+R +T++++ +ty + ++ + ++ Vr++Ha+vr+ ++ +++g +++ ++ +++t+ +
VIMSS3346230 164 VAYATGATGRFvNDTLRRNLETTAWFRKMTYRGalerYAQPFKDTVLVRLMHAQVRAGLRRSwgneqfAHHGnPISNSMMMGAAMTFGLIPPlidHQ 260
677778889**888*****************98666655577789***********99844456778888889**********99976555446777 PP
MPAB_Lcp_cat 109 yerfvgpltdaeaeryyaewrrvgrllgvpprdvpatraefeaywdamlrpelevtpearellddl.....r 175
++r t+a+ ++++ w++++ +gv ++ +p+++ e + +d m++ +++ + ++ +
VIMSS3346230 261 HGRT---RTQADLQAAVMYWAYIAYIFGVAEELIPTSVSEGMETMDYMVAYAGGPSEWTDIMMGAAfgfvdK 329
7777...9*********************88888***************99999999888875555555543 PP
== domain 3 score: -0.7 bits; conditional E-value: 0.065
MPAB_Lcp_cat 90 dpelllwvhatlvdsfldayerf.vgpltdaeaer 123
d l+ w+ +t+++++ ++ r+ + +l+ a +++
VIMSS3346230 367 DARLQPWTTLTGIAVHANVTLRRvGDKLPGAARRA 401
67899999999999999666655477788888776 PP
Or compare VIMSS3346230 to CDD or PaperBLAST