VIMSS142888 has 188 amino acids
Query: Phage_Mu_Gp48 [M=150]
Accession: PF10076.13
Description: Bacteriophage Mu-like, Gp48
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.7e-25 74.7 0.0 4.4e-25 74.4 0.0 1.0 1 VIMSS142888
Domain annotation for each sequence (and alignments):
>> VIMSS142888
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 74.4 0.0 4.4e-25 4.4e-25 6 150 .] 10 185 .. 5 185 .. 0.95
Alignments for each domain:
== domain 1 score: 74.4 bits; conditional E-value: 4.4e-25
Phage_Mu_Gp48 6 llPpglqesrelqalleaeakeldrveasaddllkeqfpetatwlLpdWEkilglpddssetleeRRaavlaklsekgglsiayleklaasllGee 101
+ Pp++++ +a ++aea +d v a+ + + fp+ + L +WE+ l++++++ ++ ++R +avlakl++ gglsiay++ +a+s+ G+
VIMSS142888 10 MRPPVSYDTVGETAEIKAEAGVFDIVADHAEGVKNAPFPDAENDYLYRWEELLAITPPAGANTQQRTDAVLAKLNALGGLSIAYFTAIAESA-GY- 103
558888888888999*****************************************************************************.*9. PP
Phage_Mu_Gp48 102 eieItenk.................erYilqVkvp...........gasgagenlea.....lecelerikPahtdvilaya 150
+++I e + + + V+++ g+s+ag++++ +e+++e++kPa t+ +++y+
VIMSS142888 104 TVTIYEEDqfragescagdclntedAIWRWCVDIAdgkatayifraGQSRAGDRISVytdpiIETMFEELKPAWTYCRFEYE 185
****99999****************99999999999999*******9999999999899********************995 PP
Or compare VIMSS142888 to CDD or PaperBLAST