PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS3674196 to PF10076 (Phage_Mu_Gp48)

VIMSS3674196 has 208 amino acids

Query:       Phage_Mu_Gp48  [M=150]
Accession:   PF10076.13
Description: Bacteriophage Mu-like, Gp48
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.9e-25   73.5   0.2    1.2e-24   73.1   0.2    1.1  1  VIMSS3674196  


Domain annotation for each sequence (and alignments):
>> VIMSS3674196  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.1   0.2   1.2e-24   1.2e-24       2     142 ..       4     144 ..       3     152 .. 0.91

  Alignments for each domain:
  == domain 1  score: 73.1 bits;  conditional E-value: 1.2e-24
  Phage_Mu_Gp48   2 ellallPpglqesrelqalleaeakeldrveasaddllkeqfpetat.wlLpdWEkilglpd.dssetleeRRaavlaklsekgglsiayleklaa 95 
                    +l++ lPp   +++e+++++++e+ el+  e+  +++lke f++tat  +++  E+ +++     ++tle R+ +++++  +k++++ ++le  ++
   VIMSS3674196   4 KLINFLPPQISDIEEFKNIMATENVELELIEKGQERILKENFIDTATdYGIKHKEQLFKIRAdLVNDTLEFRKLRIKNRKMDKMPITQRSLEHKLK 99 
                    799*********************************************************9956678***************************** PP

  Phage_Mu_Gp48  96 sllGeeeieItenkerYilqVkvpgasgagenlealecelerikPah 142
                    +l Ge++++++  +++Y l+V+++    +   + ++ + ++ i P++
   VIMSS3674196 100 TLFGEGNYKVEVLNDEYVLKVEIN--TFDWSMFNEIIDNFRYIIPCN 144
                    ************************..555555666666666666666 PP



Or compare VIMSS3674196 to CDD or PaperBLAST